Het-PDB Navi2 (PDB: 6EYJ)

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Ligands
Code	Name		Style	Show	Link
C5H	(2~{S})-3-cyclohexyl-2-[(2~{R},3~{S},4~{S},5~{R},6~{R})-2-(hydroxymethyl)-3,5-bis(oxidanyl)-6-[(1~{R},2~{R})-2-[(2~{R},3~{S},4~{R},5~{S},6~{R})-3,4,5-tris(oxidanyl)-6-(trifluoromethyl)oxan-2-yl]oxycyclohexyl]oxy-oxan-4-yl]oxy-propanoic acid				PoSSuM
CA	Calcium ion				PoSSuM

Non-standard Residues
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Glycosylation
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NAG	2-acetamido-2-deoxy-beta-D-glucopyranose

Modification
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Download interaction data: 6EYJ

Code :

6EYJ PDBj RCSB PDB PDBe

Header :

CELL ADHESION

Title :

E-selectin lectin, EGF-like and two SCR domains complexed with glycomimetic ligand NV354

Release Data :

2018-11-21

Compound :

mol_id	molecule	chains	synonym
1	E-selectin	A,B	CD62 antigen-like family member E,Endothelial leukocyte adhesion molecule 1,ELAM-1,Leukocyte-endothelial cell adhesion molecule 2,LECAM2

Source :

mol_id	organism_scientific	organism_common	expression_system
1	Homo sapiens (taxid:9606)	Human	Cricetulus griseus (taxid:10029)
	gene: SELE, ELAM1 expression_system_cell_line: CHO expression_system_plasmid: pCDNA3.1

Authors :

Jakob, R.P., Zihlmann, P., Preston, R.C., Varga, N., Ernst, B., Maier, T.

Keywords :

CELL ADHESION, CELL-ADHESION MOLECULE, C-TYPE LECTIN, INFLAMMATION, LEUKOCYTE, GLYCOMIMETIC, CATCH-BOND

Exp. method :

X-RAY DIFFRACTION ( 2.20 Å )

Citation :

E-selectin lectin with different glycomimetic ligands

Varga, N.,Zihlmann, P.,Preston, R.C. et al.
To Be Published

PDB ID: 6EYJ