Brand  (β version)

PDB ID: 5VY7

Hetero Atom Contents

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Ligands
Code Name Style Show Link
Non-standard Residues
Code Name Show
0DA 2'-deoxy-L-ribo-furanosyl adenosine-5'-monophosphate
0DC 2'-deoxy-L-ribo-furanosyl cytosine-5'-monophosphate
0DG 2'-deoxy-L-ribo-furanosyl guanine-5'-monophosphate
0DT 2'-deoxy-L-ribo-furanosyl thymidine-5'-monophosphate
Glycosylation
Code Name Emphasize
Modification
Code Name Show

Structure summary

Code : 5VY7   PDBj   RCSB PDB   PDBe
Header : DNA
Title : A self-assembling L-form DNA crystal lattice
Release Data : 2017-08-09
Compound :
mol_id molecule chains
1 DNA (5'-D(*GP*AP*GP*CP*AP*GP*AP*CP*CP*TP*GP*AP*CP*GP*GP*AP*AP*CP*TP*CP*A)-3') A
mol_id molecule chains
2 DNA (5'-D(P*CP*CP*GP*TP*CP*A)-3') B
mol_id molecule chains
3 DNA (5'-D(*TP*CP*TP*GP*AP*GP*TP*T)-3') C
mol_id molecule chains
4 DNA (5'-D(P*GP*GP*TP*CP*TP*GP*C)-3') D
Source :
mol_id organism_scientific
1 Synthetic construct  (taxid:32630)
synthetic: yes
mol_id organism_scientific
2 Synthetic construct  (taxid:32630)
synthetic: yes
mol_id organism_scientific
3 Synthetic construct  (taxid:32630)
synthetic: yes
mol_id organism_scientific
4 Synthetic construct  (taxid:32630)
synthetic: yes
Authors : Simmons, C.R., Yan, H.
Keywords : DNA nanotechnology, self-assembly, DNA structure, DNA
Exp. method : X-RAY DIFFRACTION ( 3.00 Å )
Citation :

Tuning the Cavity Size and Chirality of Self-Assembling 3D DNA Crystals.

Simmons, C.R.,Zhang, F.,MacCulloch, T.  et al.
(2017)  J. Am. Chem. Soc.  139 : 11254 - 11260

PubMed: 28731332
DOI: 10.1021/jacs.7b06485