Brand  (β version)

PDB ID: 5CTI

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Ligands
Code Name Style Show Link
GOL Glycerol PoSSuM
Non-standard Residues
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Glycosylation
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Structure summary

Code : 5CTI   PDBj   RCSB PDB   PDBe
Header : STRUCTURAL PROTEIN
Title : Crystal structure of the type IX collagen NC2 hetero-trimerization domain with a guest fragment a2a1a1 of type I collagen (native form)
Release Data : 2016-08-03
Compound :
mol_id molecule chains synonym
1 Collagen alpha-1(I) chain,Collagen alpha-1(IX) chain A Alpha-1 type I collagen
fragment: UNP Residues 572-583,UNP Residues 754-789
mol_id molecule chains synonym
2 Collagen alpha-2(I) chain,Collagen alpha-2(IX) chain B Alpha-2 type I collagen
fragment: UNP Residues 484-495,UNP Residues 517-552
mol_id molecule chains synonym
3 Collagen alpha-1(I) chain,Collagen alpha-3(IX) chain C Alpha-1 type I collagen
fragment: UNP Residues 572-583,UNP Residues 517-553
Source :
mol_id organism_scientific organism_common expression_system
1 Homo sapiens  (taxid:9606) Human Escherichia coli  (taxid:469008)
gene: COL9A1
expression_system_strain: BL21(DE3)
expression_system_vector_type: plasmid
expression_system_plasmid: pET22b(+)
mol_id organism_scientific organism_common expression_system
2 Homo sapiens  (taxid:9606) Human Escherichia coli  (taxid:469008)
gene: COL9A2
expression_system_strain: BL21(DE3)
expression_system_vector_type: plasmid
expression_system_plasmid: pET22b(+)
mol_id organism_scientific organism_common expression_system
3 Homo sapiens  (taxid:9606) Human Escherichia coli  (taxid:469008)
gene: COL9A3
expression_system_strain: BL21(DE3)
expression_system_vector_type: plasmid
expression_system_plasmid: pET22b(+)
Authors : Boudko, S.P., Bachinger, H.P.
Keywords : collagen, hetero-trimerization, chain stagger, chain register, triple helix, STRUCTURAL PROTEIN
Exp. method : X-RAY DIFFRACTION ( 1.8994 Å )
Citation :

Structural insight for chain selection and stagger control in collagen.

Boudko, S.P.,Bachinger, H.P.
(2016)  Sci Rep  6 : 37831 - 37831

PubMed: 27897211
DOI: 10.1038/srep37831

Reaction

Chain : C
UniProt : P02452 (CO1A1_HUMAN)
Reaction : -
Chain : A
UniProt : P20849 (CO9A1_HUMAN)
Reaction : -
Chain : B
UniProt : P08123 (CO1A2_HUMAN)
Reaction : -
Chain : B
UniProt : Q14055 (CO9A2_HUMAN)
Reaction : -
Chain : C
UniProt : Q14050 (CO9A3_HUMAN)
Reaction : -