Het-PDB Navi2 (PDB: 3U60)

color scheme of protein:

hetatm:

information

centroid:

interaction residue:

chain: Hide other chain(s)

Ligands
Code	Name	Link
08T	[[[(2r,3s,4r,5r)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-tris(fluoranyl)beryllium	PoSSuM
ADP	Adenosine-5'-diphosphate	PoSSuM
MG	Magnesium ion	PoSSuM

Modified Residues
Code	Name	Link
MSE	Selenomethionine	PoSSuM

Download interaction data: 3U60

Code :

3U60 PDBj RCSB PDB PDBe

Header :

DNA BINDING PROTEIN/DNA

Title :

Structure of T4 Bacteriophage Clamp Loader Bound To Open Clamp, DNA and ATP Analog

Release Data :

2012-01-04

Compound :

mol_id	molecule	chains	synonym
1	DNA polymerase accessory protein 44	B,C,D,E	Clamp loader large subunit, Protein Gp44

mol_id	molecule	chains
2	Template DNA strand	I

mol_id	molecule	chains
3	Primer DNA strand	J

mol_id	molecule	chains	synonym
4	DNA polymerase accessory protein 62	A	Clamp loader small subunit, Protein Gp62

mol_id	molecule	chains	synonym
5	DNA polymerase processivity component	G,H,F	DNA polymerase accessory protein 45, Gp45

Source :

mol_id	organism_scientific	expression_system
1	Enterobacteria phage T4 (taxid:10665)	Escherichia coli (taxid:562)
	gene: 44, gp44 expression_system_strain: T7 Express

mol_id	organism_scientific
2
	synthetic: yes

mol_id	organism_scientific
3
	synthetic: yes

mol_id	organism_scientific	expression_system
4	Enterobacteria phage T4 (taxid:10665)	Escherichia coli (taxid:562)
	gene: 62, gp62 expression_system_strain: T7 Express

mol_id	organism_scientific	expression_system
5	Enterobacteria phage T4 (taxid:10665)	Escherichia coli (taxid:562)
	gene: 45, gp45 expression_system_strain: T7 Express

Authors :

Kelch, B.A., Makino, D.L., O'Donnell, M., Kuriyan, J.

Keywords :

AAA+, ATP hydrolase, sliding clamp, DNA BINDING PROTEIN-DNA complex

Exp. method :

X-RAY DIFFRACTION ( 3.340 Å )

Citation :

How a DNA polymerase clamp loader opens a sliding clamp.

Kelch, B.A.,Makino, D.L.,O'Donnell, M. et al.
(2011) Science 334 : 1675 - 1680

PDB ID: 3U60