Brand  (β version)

PDB ID: 3B1E

Hetero Atom Contents

  The number of atoms exceeds 100,000.
  So, it can not be displayed here.

Select unit:

Select hetatm:   

close
information
centroid:
interaction residue:

Select chain:   Sequence  

Data format:   

Color scheme of protein:

Ligands
Code Name Style Show Link
0JO 2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid PoSSuM
EPE 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid PoSSuM
NA Sodium ion PoSSuM
Non-standard Residues
Code Name Show
Glycosylation
Code Name Emphasize
Modification
Code Name Show

Structure summary

Code : 3B1E   PDBj   RCSB PDB   PDBe
Header : LYASE
Title : Crystal structure of betaC-S lyase from Streptococcus anginosus in complex with L-serine: alpha-Aminoacrylate form
Release Data : 2012-06-27
Compound :
mol_id molecule chains
1 BetaC-S lyase A,B,C,D
ec: 4.4.1.8
Source :
mol_id organism_scientific expression_system
1 Streptococcus anginosus  (taxid:1328) Escherichia coli  (taxid:562)
strain: IMU102
gene: lcd
expression_system_strain: BL21(DE3)
expression_system_vector_type: Plasmid
expression_system_plasmid: pGEX-6P-1
Authors : Kezuka, Y., Yoshida, Y., Nonaka, T.
Keywords : LYASE
Exp. method : X-RAY DIFFRACTION ( 1.78 Å )
Citation :

Structural insights into catalysis by beta C-S lyase from Streptococcus anginosus

Kezuka, Y.,Yoshida, Y.,Nonaka, T.
(2012)  Proteins  80 : 2447 - 2458

PubMed: 22674431
DOI: 10.1002/prot.24129

Crystallization and preliminary X-ray analysis of betaC-S lyases from two oral Streptococci

Kezuka, Y.,Yoshida, Y.,Nonaka, T.
(2009)  Acta Crystallogr.,Sect.F  65 : 874 - 877

PubMed: 19724121
DOI: 10.1107/S1744309109030371

Molecular and enzymatic characterization of betaC-S lyase in Streptococcus constellatus

Yoshida, Y.,Ito, S.,Sasaki, T.  et al.
(2008)  Oral Microbiol.Immunol.  23 : 245 - 253

PubMed: 18402612
DOI: 10.1111/j.1399-302X.2007.00419.x

Differences in the betaC-S lyase activities of viridans group streptococci

Yoshida, Y.,Negishi, M.,Amano, A.  et al.
(2003)  Biochem.Biophys.Res.Commun.  300 : 55 - 60

PubMed: 12480520

lcd from Streptococcus anginosus encodes a C-S lyase with alpha,beta-elimination activity that degrades L-cysteine

Yoshida, Y.,Nakano, Y.,Amano, A.  et al.
(2002)  Microbiology  148 : 3961 - 3970

PubMed: 12480900

Reaction

Chain : A, B, C, D
UniProt : A6BMJ3 (A6BMJ3_STRAP)
Reaction : -