Brand  (β version)

PDB ID: 122D

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Ligands
Code Name Style Show Link
Non-standard Residues
Code Name Show
5CM 5-methyl-2'-deoxy-cytidine-5'-monophosphate
Glycosylation
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Modification
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Structure summary

Code : 122D   PDBj   RCSB PDB   PDBe
Header : DNA
Title : DNA HELIX STRUCTURE AND REFINEMENT ALGORITHM: COMPARISON OF MODELS FOR D(CCAGGCM==5==CTGG) DERIVED FROM NUCLSQ, TNT, AND X-PLOR
Release Data : 1993-10-15
Compound :
mol_id molecule chains
1 DNA (5'-D(*CP*CP*AP*GP*GP*CP*(5CM)P*TP*GP*G)-3') A,B
Source :
mol_id organism_scientific
1
synthetic: yes
Authors : Hahn, M., Heinemann, U.
Keywords : B-DNA, DOUBLE HELIX, MODIFIED, DNA
Exp. method : X-RAY DIFFRACTION ( 1.700 Å )
Citation :

DNA helix structure and refinement algorithm: comparison of models for d(CCAGGCm5CTGG) derived from NUCLSQ, TNT and X-PLOR.

Hahn, M.,Heinemann, U.
(1993)  Acta Crystallogr.,Sect.D  49 : 468 - 477

PubMed: 15299506
DOI: 10.1107/S0907444993004858

C-C-A-G-G-C-M5C-T-G-G: Helical Fine Structure, Hydration, and Comparison with C-C-A-G-G-C-C-T-G-G

Heinemann, U.,Hahn, M.
(1992)  J.Biol.Chem.  267 : 7332 - 7341

Double Helix Conformation, Groove Dimensions and Ligand Binding Potential of a G/C-Stretch in B-DNA

Heinemann, U.,Alings, C.,Bansal, M.
(1992)  Embo J.  11 : 1931 - 1939

The Conformation of a B-DNA Decamer Is Mainly Determined by Its Sequence and Not by Crystal Environment

Heinemann, U.,Alings, C.
(1991)  Embo J.  10 : 35 - 43

Crystallographic Study of One Turn of G/c-Rich B-DNA

Heinemann, U.,Alings, C.
(1989)  J.Mol.Biol.  210 : 369 - 381