Het-PDB Navi2 (PDB: 4DLE)

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Data format:

Color scheme of protein:

Ligands
Code	Name	Link
DCT	2',3'-dideoxycytidine 5'-triphosphate	PoSSuM
EDO	1,2-ethanediol	PoSSuM
GOL	Glycerol	PoSSuM
MG	Magnesium ion	PoSSuM
MN	Manganese (II) ion	PoSSuM

Non-standard Residues
Code	Name	Show
DOC	2',3'-dideoxycytidine-5'-monophosphate
FP9	(4r)-4-fluoro-L-proline

Glycosylation
Code	Name	Emphasize

Modification
Code	Name	Show

Download interaction data: 4DLE

Code :

4DLE PDBj RCSB PDB PDBe

Header :

Transferase/DNA

Title :

Ternary Structure of the large Fragment of Taq DNA Polymerase: 4-Fluoroproline Variant

Release Data :

2012-11-28

Compound :

mol_id	molecule	chains	synonym
1	DNA polymerase I, thermostable	A	Taq polymerase 1
	ec: 2.7.7.7 fragment: UNP RESIDUES 293-832

mol_id	molecule	chains
2	DNA primer	B

mol_id	molecule	chains
3	DNA template	C

Source :

mol_id	organism_scientific	expression_system
1	Thermus aquaticus (taxid:271)	Escherichia coli (taxid:562)
	gene: polA, pol1

mol_id	organism_scientific
2
	synthetic: yes

mol_id	organism_scientific
3
	synthetic: yes

Authors :

Holzberger, B., Obeid, S., Welte, W., Diederichs, K., Marx, A.

Keywords :

DNA polymerase, non-canonical amino acid, unnatural amino acid, 4-fluoroproline, Transferase-DNA complex

Exp. method :

X-RAY DIFFRACTION ( 2.44 Å )

Citation :

Structural insights into the potential of 4-fluoroproline to modulate biophysical properties of protein

Holzberger, B.,Obeid, S.,Welte, W. et al.
(2012) Chem Sci 3 : 2924 - 2931

Chain :

UniProt :

P19821 (DPO1_THEAQ)

Reaction:	EC:	Evidence:
Reaction:	Physiological Direction:	Evidence:
a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) = diphosphate + DNA(n+1)	2.7.7.7	-
	-	-

PDB ID: 4DLE