data_A1EJ2 # _chem_comp.id A1EJ2 _chem_comp.name D-Erythrose _chem_comp.type D-saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C4 H8 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-01-18 _chem_comp.pdbx_modified_date 2025-09-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 120.104 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1EJ2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9LFQ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1EJ2 C3 C1 C 0 1 N N R N N N 10.785 10.059 -0.882 0.558 -0.270 -0.184 C5 A1EJ2 1 A1EJ2 C2 C2 C 0 1 N N R N N N 11.325 9.202 -2.037 -0.719 0.205 0.512 C6 A1EJ2 2 A1EJ2 C4 C3 C 0 1 N N N N N N 10.846 9.329 0.446 1.737 0.592 0.269 C7 A1EJ2 3 A1EJ2 C1 C4 C 0 1 N N N N N N 11.745 10.057 -3.198 -1.881 -0.644 0.065 C8 A1EJ2 4 A1EJ2 O3 O1 O 0 1 N N N N N N 11.545 11.264 -0.781 0.806 -1.635 0.157 O1 A1EJ2 5 A1EJ2 O2 O2 O 0 1 N N N N N N 10.300 8.291 -2.445 -0.968 1.570 0.170 O2 A1EJ2 6 A1EJ2 O4 O3 O 0 1 N N N N N N 10.462 10.185 1.512 2.906 0.225 -0.467 O3 A1EJ2 7 A1EJ2 O1 O4 O 0 1 N N N N N N 11.000 10.515 -4.011 -2.825 -0.133 -0.488 O4 A1EJ2 8 A1EJ2 H3 H1 H 0 1 N N N N N N 9.734 10.302 -1.097 0.437 -0.182 -1.264 H1 A1EJ2 9 A1EJ2 H2 H2 H 0 1 N N N N N N 12.199 8.641 -1.674 -0.599 0.117 1.592 H2 A1EJ2 10 A1EJ2 H41 H3 H 0 1 N N N N N N 10.165 8.466 0.414 1.509 1.643 0.089 H3 A1EJ2 11 A1EJ2 H42 H4 H 0 1 N N N N N N 11.875 8.979 0.618 1.914 0.436 1.333 H4 A1EJ2 12 A1EJ2 H1 H5 H 0 1 N N N N N N 12.798 10.273 -3.305 -1.870 -1.710 0.241 H5 A1EJ2 13 A1EJ2 HO3 H6 H 0 1 N Y N N N N 11.209 11.792 -0.066 0.924 -1.788 1.105 H6 A1EJ2 14 A1EJ2 HO2 H7 H 0 1 N Y N N N N 9.940 8.571 -3.279 -1.086 1.723 -0.778 H7 A1EJ2 15 A1EJ2 HO4 H8 H 0 1 N Y N N N N 10.507 9.709 2.333 3.695 0.733 -0.231 H8 A1EJ2 16 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1EJ2 O1 C1 DOUB N N 1 A1EJ2 C1 C2 SING N N 2 A1EJ2 O2 C2 SING N N 3 A1EJ2 C2 C3 SING N N 4 A1EJ2 C3 O3 SING N N 5 A1EJ2 C3 C4 SING N N 6 A1EJ2 C4 O4 SING N N 7 A1EJ2 C3 H3 SING N N 8 A1EJ2 C2 H2 SING N N 9 A1EJ2 C4 H41 SING N N 10 A1EJ2 C4 H42 SING N N 11 A1EJ2 C1 H1 SING N N 12 A1EJ2 O3 HO3 SING N N 13 A1EJ2 O2 HO2 SING N N 14 A1EJ2 O4 HO4 SING N N 15 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1EJ2 InChI InChI 1.06 "InChI=1S/C4H8O4/c5-1-3(7)4(8)2-6/h1,3-4,6-8H,2H2/t3-,4+/m0/s1" A1EJ2 InChIKey InChI 1.06 YTBSYETUWUMLBZ-IUYQGCFVSA-N A1EJ2 SMILES_CANONICAL CACTVS 3.385 "OC[C@@H](O)[C@@H](O)C=O" A1EJ2 SMILES CACTVS 3.385 "OC[CH](O)[CH](O)C=O" A1EJ2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@H]([C@H](C=O)O)O)O" A1EJ2 SMILES "OpenEye OEToolkits" 2.0.7 "C(C(C(C=O)O)O)O" # _pdbx_chem_comp_identifier.comp_id A1EJ2 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{R},3~{R})-2,3,4-tris(oxidanyl)butanal" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1EJ2 "Create component" 2025-01-18 PDBC A1EJ2 "Initial release" 2025-09-24 RCSB #