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Ligands
Code Name Style Show Link
Non-standard Residues
Code Name Show
DP [(2~{R},3~{S},5~{R})-5-(2-azanyl-4-oxidanylidene-imidazo[1,2-a][1,3,5]triazin-8-yl)-3-oxidanyl-oxolan-2-yl]methyl dihydrogen phosphate
DZ [(2~{R},3~{S},5~{R})-5-(6-azanyl-5-nitro-2-oxidanylidene-1~{H}-pyridin-3-yl)-3-oxidanyl-oxolan-2-yl]methyl dihydrogen phosphate
Glycosylation
Code Name Emphasize
Modification
Code Name Show
Code : 6I4O   PDBj   RCSB PDB   PDBe
Header : DNA
Title : Dodecamer DNA containing the synthetic base pair P-Z
Release Data : 2019-06-12
Compound :
mol_id molecule chains
1 (DCZ)(DG)(DA)(DT)(DP)(DT)(DA)(DZ)(DA)(DT)(DC)(DG3) A,B
other_details: DCZ)GAT(.DP)TA(.DZ)ATCG
Source :
mol_id organism_scientific
1 Synthetic construct  (taxid:32630)
synthetic: yes
Authors : Padroni, G., Reichenbach, L.F., Parkinson, J.A., Burley, G.A.
Keywords : DNA, synthetic base pair, Z, P
Exp. method : SOLUTION NMR
Citation :

Sequence-Selective Minor Groove Recognition of a DNA Duplex Containing Synthetic Genetic Components.

Padroni, G.,Withers, J.M.,Taladriz-Sender, A.  et al.
(2019)  J.Am.Chem.Soc.  141 : 9555 - 9563

PubMed: 31117639
DOI: 10.1021/jacs.8b12444