Het-PDB Navi2 (PDB: 6GZR)

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Ligands
Code	Name		Style	Show	Link
FH8	5-carboxy methylrhodamine				PoSSuM

Non-standard Residues
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Glycosylation
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Download interaction data: 6GZR

Code :

6GZR PDBj RCSB PDB PDBe

Header :

RNA

Title :

Solution NMR structure of the tetramethylrhodamine (TMR) aptamer 3 in complex with 5-TAMRA

Release Data :

2019-07-17

Compound :

mol_id	molecule	chains
1	tetramethylrhodamine aptamer	A

Source :

mol_id	organism_scientific	expression_system
1	Synthetic construct (taxid:32630)	In vitro transcription vector pT7-TP(deltai) (taxid:905931)

Authors :

Duchardt-Ferner, E., Ohlenschlager, O., Kreutz, C.R., Wohnert, J.

Keywords :

RNA Aptamer, RNA-Ligand complex, three-way junction, RNA

Exp. method :

SOLUTION NMR

Citation :

Structure of an RNA aptamer in complex with the fluorophore tetramethylrhodamine.

Duchardt-Ferner, E.,Juen, M.,Bourgeois, B. et al.
(2020) Nucleic Acids Res. 48 : 949 - 961

NMR resonance assignments for the tetramethylrhodamine binding RNA aptamer 3 in complex with the ligand 5-carboxy-tetramethylrhodamine.

Duchardt-Ferner, E.,Juen, M.,Kreutz, C. et al.
(2017) Biomol NMR Assign 11 : 29 - 34

PDB ID: 6GZR