Brand  (β version)

PDB ID: 6EEE

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Ligands
Code Name Style Show Link
J4V (1r,2r,3s,5r,7r)-N-[(1r)-2-(hydroxyamino)-2-oxo-1-(3',4',5'-trifluoro[1,1'-biphenyl]-4-yl)ethyl]tricyclo[3.3.1.1~3,7~]decane-2-carboxamide PoSSuM
CO3 Carbonate ion PoSSuM
ZN Zinc ion PoSSuM
SO4 Sulfate ion PoSSuM
DMS Dimethyl sulfoxide PoSSuM
1PE Pentaethylene glycol PoSSuM
EDO 1,2-ethanediol PoSSuM
Non-standard Residues
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Structure summary

Code : 6EEE   PDBj   RCSB PDB   PDBe
Header : hydrolase/hydrolase inhibitor
Title : X-ray crystal structure of Pf-M17 in complex with inhibitor (6k) and regulatory zinc ion
Release Data : 2018-12-26
Compound :
mol_id molecule chains
1 M17 LEUCYL-AMINOPEPTIDASE A,B,C,D,E,F,G,H,I,J,K,L
mutation: N68Q, N431Q, N462Q
Source :
mol_id organism_scientific expression_system
1 Plasmodium falciparum (isolate HB3)  (taxid:137071) Escherichia coli  (taxid:562)
strain: isolate HB3
gene: PFHG_04072
Authors : Drinkwater, N., McGowan, S.
Keywords : M17 LEUCYL-AMINOPEPTIDASE, PROTEASE, INHIBITOR, HYDROXAMIC ACID, hydrolase-hydrolase inhibitor complex
Exp. method : X-RAY DIFFRACTION ( 2.30 Å )
Citation :

Hydroxamic Acid Inhibitors Provide Cross-Species Inhibition of Plasmodium M1 and M17 Aminopeptidases.

Vinh, N.B.,Drinkwater, N.,Malcolm, T.R.  et al.
(2019)  J. Med. Chem.  62 : 622 - 640

PubMed: 30537832
DOI: 10.1021/acs.jmedchem.8b01310

Reaction

Chain : A, B, C, D, E, F, G, H, I, J, K, L
UniProt : A0A0L7KHE6 (A0A0L7KHE6_PLAFX)
Reaction: EC: Evidence:
Physiological Direction:
Release of an N-terminal amino acid, Xaa-|-Yaa-, in which Xaa is preferably Leu, but may be other amino acids including Pro although not Arg or Lys, and Yaa may be Pro. Amino acid amides and methyl esters are also readily hydrolyzed, but rates on arylamides are exceedingly low. 3.4.11.1 ARBA:ARBA00000135
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