Het-PDB Navi2 (PDB: 6R1B)

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Ligands
Code	Name	Link
CH5	2-(((R)-2,3-dihydroxypropyl)phosphoryloxy)-N,N,N-trimethylethanaminium	PoSSuM
MG	Magnesium ion	PoSSuM
GOL	Glycerol	PoSSuM

Non-standard Residues
Code	Name	Show
MLZ	N-methyl-lysine

Glycosylation
Code	Name	Emphasize

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Download interaction data: 6R1B

Code :

6R1B PDBj RCSB PDB PDBe

Header :

TRANSPORT PROTEIN

Title :

Crystal structure of UgpB from Mycobacterium tuberculosis in complex with glycerophosphocholine

Release Data :

2019-09-04

Compound :

mol_id	molecule	chains
1	Putative Sn-glycerol-3-phosphate-binding lipoprotein UgpB	A
	mutation: K161(MLZ)

mol_id	molecule	chains
2	Putative Sn-glycerol-3-phosphate-binding lipoprotein UgpB	B
	mutation: K161(MLZ)

mol_id	molecule	chains
3	Putative Sn-glycerol-3-phosphate-binding lipoprotein UgpB	C
	mutation: K161(MLZ)

mol_id	molecule	chains
4	Putative Sn-glycerol-3-phosphate-binding lipoprotein UgpB	D
	mutation: K161(MLZ)

Source :

mol_id	organism_scientific	expression_system
1	Mycobacterium tuberculosis (taxid:1773)	Mycobacterium smegmatis (taxid:1772)
	gene: ugpB, ERS007679_03701 expression_system_plasmid: pYUB1062

mol_id	organism_scientific	expression_system
2	Mycobacterium tuberculosis (taxid:1773)	Mycobacterium smegmatis (taxid:1772)
	gene: ugpB, ERS007679_03701 expression_system_plasmid: pYUB1062

mol_id	organism_scientific	expression_system
3	Mycobacterium tuberculosis (taxid:1773)	Mycobacterium smegmatis (taxid:1772)
	gene: ugpB, ERS007679_03701 expression_system_plasmid: pYUB1062

mol_id	organism_scientific	expression_system
4	Mycobacterium tuberculosis (taxid:1773)	Mycobacterium smegmatis (taxid:1772)
	gene: ugpB, ERS007679_03701 expression_system_plasmid: pYUB1062

Authors :

Fenn, J., Nepravishta, R., Guy, C.S., Harrison, J., Angulo, J., Cameron, A.D., Fullam, E.

Keywords :

Mycobacterium tuberculosis UgpB substrate-binding protein glycerophosphocholine, TRANSPORT PROTEIN

Exp. method :

X-RAY DIFFRACTION ( 2.27000203237 Å )

Citation :

Structural Basis of Glycerophosphodiester Recognition by theMycobacterium tuberculosisSubstrate-Binding Protein UgpB.

Fenn, J.S.,Nepravishta, R.,Guy, C.S. et al.
(2019) Acs Chem.Biol. 14 : 1879 - 1887

PDB ID: 6R1B