Het-PDB Navi2 (PDB: 6Q8H)

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Ligands
Code	Name	Link
CA	Calcium ion	PoSSuM
NH2	Amino group	PoSSuM
ZDC	3,7-anhydro-2,8-dideoxy-L-glycero-D-gluco-octonic acid	PoSSuM

Glycosylation
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Download interaction data: 6Q8H

Code :

6Q8H PDBj RCSB PDB PDBe

Header :

ANTIBIOTIC

Title :

Structure of Fucosylated D-antimicrobial peptide SB10 in complex with the Fucose-binding lectin PA-IIL at 1.707 Angstrom resolution

Release Data :

2019-03-20

Compound :

mol_id	molecule	chains	synonym
1	Fucose-binding lectin	A	Fucose-binding lectin II (PA-IIL),Fucose-binding lectin PA-IIL
	other_details: Fucose-binding lectin PA-IIL LecB

mol_id	molecule	chains
2	SB10	B,C
	other_details: Fucosylated D-antimicrobial peptide SB10. Full sequence: (FUD)(DLE)(DLE)(DLY)(DAL)(DLE)(DLY)(DLY)(DLE)(DAL)(DLY)(DLY)(DTY)(DLY)

Source :

mol_id	organism_scientific	expression_system
1	Pseudomonas aeruginosa (taxid:287)	Escherichia coli 'BL21-Gold(DE3)pLysS AG' (taxid:866768)
	gene: lecB, C0043_24310, C0044_25260, C0046_23510, CAZ10_21840, CW299_25270, DI492_13230, DT376_00595, PAERUG_E15_London_28_01_14_00983, PAMH19_1713, RW109_RW109_02453

mol_id	organism_scientific
2	Synthetic construct (taxid:32630)
	synthetic: yes

Authors :

Baeriswyl, S., Stocker, A., Reymond, J.L.

Keywords :

Antimicrobial, Lectin, Complex, ANTIBIOTIC

Exp. method :

X-RAY DIFFRACTION ( 1.7070 Å )

Citation :

X-ray Crystal Structures of Short Antimicrobial Peptides as Pseudomonas aeruginosa Lectin B Complexes.

Baeriswyl, S.,Gan, B.H.,Siriwardena, T.N. et al.
(2019) Acs Chem.Biol. 14 : 758 - 766

PDB ID: 6Q8H