Brand  (β version)

color scheme of protein:

hetatm:

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information
centroid:
interaction residue:

chain: Hide other chain(s)

Ligands
Code Name Link
CA Calcium ion
DLE D-leucine
NH2 Amino group
ZDC 3,7-anhydro-2,8-dideoxy-L-glycero-D-gluco-octonic acid
Modified Residues
Code Name Link
DAL D-alanine
DLY D-lysine
DTY D-tyrosine
FUD D-fructose
Code : 6Q8H
Header : ANTIBIOTIC
Title : Structure of Fucosylated D-antimicrobial peptide SB10 in complex with the Fucose-binding lectin PA-IIL at 1.707 Angstrom resolution
Release Data : 2019-03-20
Compound :
mol_id molecule chains synonym
1 Fucose-binding lectin A Fucose-binding lectin II (PA-IIL),Fucose-binding lectin PA-IIL
other_details: Fucose-binding lectin PA-IIL LecB
mol_id molecule chains
2 SB10 B,C
other_details: Fucosylated D-antimicrobial peptide SB10. Full sequence: (FUD)(DLE)(DLE)(DLY)(DAL)(DLE)(DLY)(DLY)(DLE)(DAL)(DLY)(DLY)(DTY)(DLY)
Source :
mol_id organism_scientific expression_system
1 Pseudomonas aeruginosa  (taxid:287) Escherichia coli 'BL21-Gold(DE3)pLysS AG'  (taxid:866768)
gene: lecB, C0043_24310, C0044_25260, C0046_23510, CAZ10_21840, CW299_25270, DI492_13230, DT376_00595, PAERUG_E15_London_28_01_14_00983, PAMH19_1713, RW109_RW109_02453
mol_id organism_scientific
2 Synthetic construct  (taxid:32630)
synthetic: yes
Authors : Baeriswyl, S., Stocker, A., Reymond, J.L.
Keywords : Antimicrobial, Lectin, Complex, ANTIBIOTIC
Exp. method : X-RAY DIFFRACTION ( 1.7070 Å )
Citation :

X-ray Crystal Structures of Short Antimicrobial Peptides as Pseudomonas aeruginosa Lectin B Complexes.

Baeriswyl, S.,Gan, B.H.,Siriwardena, T.N.  et al.
(2019)  Acs Chem.Biol.  14 : 758 - 766

PubMed: 30830745
DOI: 10.1021/acschembio.9b00047

Chain : A
UniProt : A0A069Q9V4 (No found in current UniProtKB/SwissProt)
Reaction : -