Het-PDB Navi2 (PDB: 6K3K)

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Ligands
Code	Name		Style	Show	Link
ZN	Zinc ion				PoSSuM

Non-standard Residues
Code	Name	Show
C38	5-iodo-2'-deoxy-cytidine-5'-monophosphate

Glycosylation
Code	Name	Emphasize

Modification
Code	Name	Show

Download interaction data: 6K3K

Code :

6K3K PDBj RCSB PDB PDBe

Header :

HYDROLASE/DNA

Title :

Solution structure of APOBEC3G-CD2 with ssDNA, Product B

Release Data :

2019-06-12

Compound :

mol_id	molecule	chains	synonym
1	DNA dC->dU-editing enzyme APOBEC-3G	A	APOBEC-related cytidine deaminase,ARCD,APOBEC-related protein 9,ARP-9,CEM-15,CEM15,Deoxycytidine deaminase,A3G
	ec: 3.5.4.-

mol_id	molecule	chains
2	DNA/RNA (5'-D(APTPTPCPUP(ICY)PAPAPTPT)-3')	B

Source :

mol_id	organism_scientific	organism_common	expression_system
1	Homo sapiens (taxid:9606)	Human	Escherichia coli (taxid:562)
	gene: APOBEC3G

mol_id	organism_scientific
2	Synthetic construct (taxid:32630)
	synthetic: yes

Authors :

Cao, C., Yan, X., Lan, W., Wang, C.

Keywords :

APOBEC3G, DNA cytidine deaminase complex with DNA, HYDROLASE-DNA complex

Exp. method :

SOLUTION NMR

Citation :

Structural Investigations on the Interactions between Cytidine Deaminase Human APOBEC3G and DNA.

Yan, X.,Lan, W.,Wang, C. et al.
(2019) Chem Asian J 14 : 2235 - 2241

Chain :

UniProt :

Q9HC16 (ABC3G_HUMAN)

Reaction:	EC:	Evidence:
Reaction:	Physiological Direction:	Evidence:
a 2'-deoxycytidine in single-stranded DNA + H(+) + H2O = a 2'- deoxyuridine in single-stranded DNA + NH4(+)	3.5.4.38	PubMed:12808465, PubMed:18288108, PubMed:18849968, PubMed:19153609
	-

PDB ID: 6K3K