Brand  (β version)

PDB ID: 6H0S

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Ligands
Code Name Style Show Link
GOL Glycerol PoSSuM
ZN Zinc ion PoSSuM
Non-standard Residues
Code Name Show
FOX ((1r,2s,4r)-4-{[2-amino-5-(formylamino)-6-oxo-3,6-dihydropyrimidin-4-yl]amino}-2-hydroxycyclopentyl)methyl 5'-phosphate
Glycosylation
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Structure summary

Code : 6H0S   PDBj   RCSB PDB   PDBe
Header : HYDROLASE
Title : Crystal structure of the complex between the Lactococcus lactis FPG mutant G226P and a Fapy-dG containing DNA
Release Data : 2019-07-31
Compound :
mol_id molecule chains synonym
1 Formamidopyrimidine-DNA glycosylase A Fapy-DNA glycosylase,DNA-(apurinic or apyrimidinic site) lyase MutM,AP lyase MutM
ec: 3.2.2.23,4.2.99.18
mutation: G226P
mol_id molecule chains
2 DNA (5'-D(*CP*TP*CP*TP*TP*TP*(FOX)P*TP*TP*TP*CP*TP*CP*G)-3') B
mol_id molecule chains
3 DNA (5'-D(*GP*CP*GP*AP*GP*AP*AP*AP*CP*AP*AP*AP*GP*A)-3') C
Source :
mol_id organism_scientific expression_system
1 Lactococcus lactis subsp. cremoris  (taxid:1359) Escherichia coli  (taxid:562)
gene: mutM, fpg, NCDO763_0992
expression_system_plasmid: pMAL-C
mol_id organism_scientific
2 Synthetic construct  (taxid:32630)
synthetic: yes
mol_id organism_scientific
3 Synthetic construct  (taxid:32630)
synthetic: yes
Authors : Coste, F., Castaing, B., Carell, T.
Keywords : PROTEIN-DNA COMPLEX, GLYCOSYLASE, HYDANTOIN LESION, HYDROLASE
Exp. method : X-RAY DIFFRACTION ( 1.75 Å )
Citation :

Crystal structure of the complex between the Lactococcus lactis FPG mutant G226P and a Fapy-dG containing DNA

Coste, F.,Castaing, B.,Carell, T.
To Be Published 

Reaction

Chain : A
UniProt : A0A165FVI1
Reaction : -