Het-PDB Navi2 (PDB: 6GDM)

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Ligands
Code	Name	Link
DMS	Dimethyl sulfoxide	PoSSuM
F3Z	(3~{R})-1-[2-oxidanylidene-2-[4-(4-pyrimidin-2-ylphenyl)piperazin-1-yl]ethyl]-~{N}-(3-pyridin-4-yl-1~{H}-indazol-5-yl)pyrrolidine-3-carboxamide	PoSSuM
SO4	Sulfate ion	PoSSuM

Non-standard Residues
Code	Name	Show
CME	S,S-(2-hydroxyethyl)thiocysteine

Glycosylation
Code	Name	Emphasize

Modification
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Download interaction data: 6GDM

Code :

6GDM PDBj RCSB PDB PDBe

Header :

SIGNALING PROTEIN

Title :

Fragment-based discovery of a highly potent, orally bioavailable inhibitor which modulates the phosphorylation and catalytic activity of ERK1/2

Release Data :

2018-05-30

Compound :

mol_id	molecule	chains	synonym
1	Mitogen-activated protein kinase 1	A	MAPK 1,ERT1,Extracellular signal-regulated kinase 2,ERK-2,MAP kinase isoform p42,p42-MAPK,Mitogen-activated protein kinase 2,MAPK 2
	ec: 2.7.11.24

Source :

mol_id	organism_scientific	organism_common	expression_system
1	Homo sapiens (taxid:9606)	Human	Escherichia coli BL21(DE3) (taxid:469008)
	gene: MAPK1, ERK2, PRKM1, PRKM2

Authors :

O'Reilly, M.

Keywords :

Erk2 Kinase inhibitor, SIGNALING PROTEIN

Exp. method :

X-RAY DIFFRACTION ( 1.91 Å )

Citation :

Fragment-Based Discovery of a Potent, Orally Bioavailable Inhibitor That Modulates the Phosphorylation and Catalytic Activity of ERK1/2.

Heightman, T.D.,Berdini, V.,Braithwaite, H. et al.
(2018) J. Med. Chem. 61 : 4978 - 4992

Chain :

UniProt :

P28482 (MK01_HUMAN)

Reaction:	EC:	Evidence:
Reaction:	Physiological Direction:	Evidence:
ATP + L-seryl-[protein] = ADP + H(+) + O-phospho-L-seryl- [protein]	2.7.11.24	-
	-	-
ATP + L-threonyl-[protein] = ADP + H(+) + O-phospho-L- threonyl-[protein]	2.7.11.24	-
	-	-

PDB ID: 6GDM