Het-PDB Navi2 (PDB: 6FL1)

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Ligands
Code	Name		Style	Show	Link
ZN	Zinc ion				PoSSuM

Non-standard Residues
Code	Name	Show
FOX	((1r,2s,4r)-4-{[2-amino-5-(formylamino)-6-oxo-3,6-dihydropyrimidin-4-yl]amino}-2-hydroxycyclopentyl)methyl 5'-phosphate

Glycosylation
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Download interaction data: 6FL1

Code :

6FL1 PDBj RCSB PDB PDBe

Header :

HYDROLASE

Title :

Crystal structure of the complex between the Lactococcus lactis FPG mutant T221P and a Fapy-dG containing DNA

Release Data :

2019-02-06

Compound :

mol_id	molecule	chains
1	DNA (5'-D(CPTPCPTPTPTP(FOX)PTPTPTPCPTPCP*G)-3')	B

mol_id	molecule	chains
2	DNA (5'-D(GPCPGPAPGPAPAPAPCPAPAPAPGPA)-3')	C

mol_id	molecule	chains	synonym
3	Formamidopyrimidine-DNA glycosylase	A	Fapy-DNA glycosylase,DNA-(apurinic or apyrimidinic site) lyase MutM,AP lyase MutM
	ec: 3.2.2.23,4.2.99.18 mutation: T221P

Source :

mol_id	organism_scientific
1	Synthetic construct (taxid:32630)
	synthetic: yes

mol_id	organism_scientific
2	Synthetic construct (taxid:32630)
	synthetic: yes

mol_id	organism_scientific	organism_common	expression_system
3	Lactococcus lactis subsp. cremoris (taxid:1359)	Streptococcus cremoris	Escherichia coli (taxid:562)
	gene: mutM, fpg, NCDO763_0992

Authors :

Coste, F., Castaing, B., Ober, M., Carell, T.

Keywords :

PROTEIN-DNA COMPLEX, GLYCOSYLASE, FAPY LESION, HYDROLASE

Exp. method :

X-RAY DIFFRACTION ( 1.600 Å )

Citation :

Crystal structure of the complex between the Lactococcus lactis FPG mutant T221P and a Fapy-dG containing DNA

Coste, F.,Castaing, B.,Ober, M. et al.
To Be Published

PDB ID: 6FL1