Het-PDB Navi2 (PDB: 6CYW)

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Ligands
Code	Name		Style	Show	Link
FO4	Sphingomyelin				PoSSuM

Non-standard Residues
Code	Name	Show

Glycosylation
Code	Name	Emphasize
NAG	2-acetamido-2-deoxy-beta-D-glucopyranose

Modification
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Download interaction data: 6CYW

Code :

6CYW PDBj RCSB PDB PDBe

Header :

IMMUNE SYSTEM

Title :

Structure of sphingomyelin in complex with mouse CD1d

Release Data :

2019-04-10

Compound :

mol_id	molecule	chains	synonym
1	Antigen-presenting glycoprotein CD1d1	A	MCG3074,isoform CRA_a
	fragment: UNP residues 19-297

mol_id	molecule	chains
2	Beta-2-microglobulin	B

Source :

mol_id	organism_scientific	organism_common	expression_system
1	Mus musculus (taxid:10090)	Mouse	Spodoptera frugiperda (taxid:7108)
	gene: Cd1d1, mCG_3074 expression_system_common: Fall armyworm expression_system_strain: SF9 expression_system_vector_type: plasmid expression_system_plasmid: pBACpHp10

mol_id	organism_scientific	organism_common	expression_system
2	Mus musculus (taxid:10090)	Mouse	Spodoptera frugiperda (taxid:7108)
	gene: B2m expression_system_common: Fall armyworm expression_system_strain: SF9

Authors :

Zajonc, D.M., Wang, J.

Keywords :

Glycolipid-antigen presentation, MHC-fold, Ig-fold, IMMUNE SYSTEM

Exp. method :

X-RAY DIFFRACTION ( 1.9500 Å )

Citation :

Control of CD1d-restricted antigen presentation and inflammation by sphingomyelin.

Melum, E.,Jiang, X.,Baker, K.D. et al.
(2019) Nat.Immunol. 20 : 1644 - 1655

PDB ID: 6CYW