Brand  (β version)

PDB ID: 6A1R

Hetero Atom Contents

  The number of atoms exceeds 100,000.
  So, it can not be displayed here.

Select unit:

Select hetatm:   

close
information
centroid:
interaction residue:

Select chain:   Sequence  

Data format:   

Color scheme of protein:

Ligands
Code Name Style Show Link
9OC 1-deoxy-1-[7,8-dimethyl-2,4-dioxo-5-(phenylacetyl)-1,3,4,5-tetrahydrobenzo[G]pteridin-10(2h)-yl]-5-O-phosphono-D-ribitol PoSSuM
MG Magnesium ion PoSSuM
Non-standard Residues
Code Name Show
Glycosylation
Code Name Emphasize
Modification
Code Name Show

Structure summary

Code : 6A1R   PDBj   RCSB PDB   PDBe
Header : FLAVOPROTEIN
Title : Mandelate oxidase mutant-Y128F with the N5-phenylacetyl-FMN adduct
Release Data : 2019-06-19
Compound :
mol_id molecule chains
1 4-hydroxymandelate oxidase A
ec: 1.1.3.46
mutation: Y128F
Source :
mol_id organism_scientific organism_common expression_system
1 Amycolatopsis orientalis  (taxid:31958) Nocardia orientalis Escherichia coli  (taxid:562)
gene: hmo
Authors : Li, T.L., Lin, K.H.
Keywords : FMN-dependent oxidase, FLAVOPROTEIN
Exp. method : X-RAY DIFFRACTION ( 1.652 Å )
Citation :

The flavin mononucleotide cofactor in alpha-hydroxyacid oxidases exerts its electrophilic/nucleophilic duality in control of the substrate-oxidation level.

Lyu, S.Y.,Lin, K.H.,Yeh, H.W.  et al.
(2019)  Acta Crystallogr D Struct Biol  75 : 918 - 929

PubMed: 31588923
DOI: 10.1107/S2059798319011938

Reaction

Chain : A
UniProt : O52792 (HMO_AMYOR)
Reaction: EC: Evidence:
Physiological Direction:
(S)-4-hydroxymandelate + O2 = 4-hydroxyphenylglyoxylate + H2O2 1.1.3.46 PubMed:11137816, PubMed:12240298
-
Cofactor: Evidence: Note:
FMN ECO:0000255 | PROSITE-ProRule:PRU00683
ECO:0000269 | PubMed:11137816
ECO:0000269 | PubMed:12240298
-