Brand  (β version)

PDB ID: 5YSR

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Ligands
Code Name Style Show Link
5AD 5'-deoxyadenosine PoSSuM
B12 Cobalamin PoSSuM
GOL Glycerol PoSSuM
Non-standard Residues
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Glycosylation
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Structure summary

Code : 5YSR   PDBj   RCSB PDB   PDBe
Header : LYASE
Title : Ethanolamine ammonia-lyase, AdoCbl/2-amino-1-propanol
Release Data : 2018-09-19
Compound :
mol_id molecule chains synonym
1 Ethanolamine ammonia-lyase heavy chain A,C Ethanolamine ammonia-lyase alpha subunit,Ethanolamine ammonia-lyase large subunit
ec: 4.3.1.7
mol_id molecule chains synonym
2 Ethanolamine ammonia-lyase light chain B,D Ethanolamine ammonia-lyase beta subunit,Ethanolamine ammonia-lyase small subunit
ec: 4.3.1.7
Source :
mol_id organism_scientific expression_system
1 Escherichia coli K-12  (taxid:83333) Escherichia coli BL21  (taxid:511693)
strain: K12
gene: eutB, b2441, JW2434
expression_system_strain: BL21
mol_id organism_scientific expression_system
2 Escherichia coli K-12  (taxid:83333) Escherichia coli BL21  (taxid:511693)
strain: K12
gene: eutC, b2440, JW2433
expression_system_strain: BL21
Authors : Shibata, N.
Keywords : Adenosylcobalamin, Radical enzyme, LYASE
Exp. method : X-RAY DIFFRACTION ( 2.05 Å )
Citation :

Direct Participation of a Peripheral Side Chain of a Corrin Ring in Coenzyme B12Catalysis.

Shibata, N.,Sueyoshi, Y.,Higuchi, Y.  et al.
(2018)  Angew. Chem. Int. Ed. Engl.  57 : 7830 - 7835

PubMed: 29797764
DOI: 10.1002/anie.201803591

Reaction

Chain : A, C
UniProt : P0AEJ6 (EUTB_ECOLI)
Reaction: EC: Evidence:
Physiological Direction:
ethanolamine = acetaldehyde + NH4(+) 4.3.1.7 HAMAP-Rule:MF_00861, PubMed:15466038, PubMed:19762342
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Chain : B, D
UniProt : P19636 (EUTC_ECOLI)
Reaction: EC: Evidence:
Physiological Direction:
ethanolamine = acetaldehyde + NH4(+) 4.3.1.7 HAMAP-Rule:MF_00601, PubMed:15466038, PubMed:19762342
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