Brand  (β version)

  The number of atoms exceeds 100,000.
  So, it can not be displayed here.

Select unit:

Select hetatm:   

close
information
centroid:
interaction residue:

Select chain:   Sequence  

Data format:   

Color scheme of protein:

Ligands
Code Name Style Show Link
CL Chloride ion
EDO 1,2-ethanediol
JHZ (2r,4s,6r)-4-amino-4,6-dimethyl-5-oxotetrahydro-2h-pyran-2-yl [(2r,3s,5r)-3-hydroxy-5-(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2h)-yl)tetrahydrofuran-2-yl]methyl dihydrogen diphosphate (non-preferred name)
MG Magnesium ion
SAH S-adenosyl-L-homocysteine
ZN Zinc ion
Non-standard Residues
Code Name Show
Glycosylation
Code Name Emphasize
Modification
Code Name Show
Code : 5T67   PDBj   RCSB PDB   PDBe
Header : TRANSFERASE
Title : X-ray structure of the KijD1 C3-methyltransferase from Actinomadura kijaniata in complex with SAH and dTDP-sugar product
Release Data : 2016-09-14
Compound :
mol_id molecule chains
1 Sugar 3-C-methyl transferase A,B
Source :
mol_id organism_scientific expression_system
1 Actinomadura kijaniata  (taxid:46161) Escherichia coli  (taxid:562)
gene: KijD1
expression_system_strain: Rosettsa2(DE3)
Authors : Holden, H.M., Thoden, J.B., Dow, G.T.
Keywords : C3-methyltransferase, antitumor, antibiotic, kijanimicin, TRANSFERASE
Exp. method : X-RAY DIFFRACTION ( 1.60 Å )
Citation :

Structural studies on KijD1, a sugar C-3'-methyltransferase.

Dow, G.T.,Thoden, J.B.,Holden, H.M.
(2016)  Protein Sci.  25 : 2282 - 2289

PubMed: 27595766
DOI: 10.1002/pro.3034

Chain : A, B
UniProt : B3TMQ9 (B3TMQ9_ACTKI)
Reaction : -