Het-PDB Navi2 (PDB: 5GWY)

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Ligands
Code	Name		Style	Show	Link

Non-standard Residues
Code	Name	Show
02J	5-methyl-1,2-oxazole-3-carboxylic acid
PJE	(E,4s)-4-azanyl-5-[(3s)-2-oxidanylidenepyrrolidin-3-yl]pent-2-enoic acid

Glycosylation
Code	Name	Emphasize

Modification
Code	Name	Show
010	Phenylmethanol

Download interaction data: 5GWY

Code :

5GWY PDBj RCSB PDB PDBe

Header :

HYDROLASE/HYDROLASE INHIBITOR

Title :

Structure of Main Protease from Human Coronavirus NL63: Insights for Wide Spectrum Anti-Coronavirus Drug Design

Release Data :

2017-09-20

Compound :

mol_id	molecule	chains	synonym
1	main protease	A,B	3C-like proteinase
	ec: 3.4.22.-

mol_id	molecule	chains
2	N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE	D,E

Source :

mol_id	organism_scientific	organism_common	expression_system
1	Human coronavirus NL63 (taxid:277944)	HCoV-NL63	Escherichia coli (taxid:562)
	gene: 1a

mol_id	organism_scientific
2	Synthetic construct (taxid:32630)
	synthetic: yes

Authors :

Wang, F., Chen, C., Tan, W., Yang, K., Yang, H.

Keywords :

HCoV-NL63, Main protease, Inhibitor, Complex, Drug Design, HYDROLASE-HYDROLASE INHIBITOR complex

Exp. method :

X-RAY DIFFRACTION ( 2.852 Å )

Citation :

Structure of Main Protease from Human Coronavirus NL63: Insights for Wide Spectrum Anti-Coronavirus Drug Design.

Wang, F.,Chen, C.,Tan, W. et al.
(2016) Sci Rep 6 : 22677 - 22677

Chain :

A, B

UniProt :

P0C6U6 (R1A_CVHNL)

Reaction:	EC:	Evidence:
Reaction:	Physiological Direction:	Evidence:
Thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the C-terminal Gly of ubiquitin (a 76- residue protein attached to proteins as an intracellular targeting signal).	3.4.19.12	-
	-	-

PDB ID: 5GWY