Het-PDB Navi2 (PDB: 5WKG)

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Data format:

Color scheme of protein:

Ligands
Code	Name	Link
CL	Chloride ion	PoSSuM
CUY	Tetracosyl octadecanoate	PoSSuM
D21	(2r)-1-(hexadecanoyloxy)-3-(phosphonooxy)propan-2-yl (9z)-octadec-9-enoate	PoSSuM
EDO	1,2-ethanediol	PoSSuM
IOD	Iodide ion	PoSSuM
NA	Sodium ion	PoSSuM
PEG	Di(hydroxyethyl)ether	PoSSuM

Non-standard Residues
Code	Name	Show

Glycosylation
Code	Name	Emphasize
BMA	Beta-D-mannopyranose
FUC	Alpha-L-fucopyranose
MAN	Alpha-D-mannopyranose
NAG	2-acetamido-2-deoxy-beta-D-glucopyranose

Modification
Code	Name	Show

Download interaction data: 5WKG

Code :

5WKG PDBj RCSB PDB PDBe

Header :

IMMUNE SYSTEM

Title :

Crystal Structure of Human CD1b in Complex with PA

Release Data :

2017-11-01

Compound :

mol_id	molecule	chains
1	T-cell surface glycoprotein CD1b	A

mol_id	molecule	chains
2	Beta-2-microglobulin	B

Source :

mol_id	organism_scientific	organism_common	expression_system
1	Homo sapiens (taxid:9606)	Human	Trichoplusia ni (taxid:7111)
	gene: CD1B expression_system_strain: High Five expression_system_vector_type: bacmid

mol_id	organism_scientific	organism_common	expression_system
2	Homo sapiens (taxid:9606)	Human	Trichoplusia ni (taxid:7111)
	gene: B2M, CDABP0092, HDCMA22P expression_system_strain: High Five expression_system_vector_type: bacmid

Authors :

Shahine, A., Gras, S., Rossjohn, J.

Keywords :

antigen presenting molecule, PA, phospholipid, MHC, CD1b, IMMUNE SYSTEM

Exp. method :

X-RAY DIFFRACTION ( 2.06 Å )

Citation :

A molecular basis of human T cell receptor autoreactivity toward self-phospholipids.

Shahine, A.,Van Rhijn, I.,Cheng, T.Y. et al.
(2017) Sci Immunol 2

PDB ID: 5WKG