Het-PDB Navi2 (PDB: 5VNN)

The number of atoms exceeds 100,000.
So, it can not be displayed here.

Select unit:

Select hetatm:

information

centroid:

interaction residue:

Select chain: Sequence Hide other chain(s)

Data format:

Color scheme of protein:

Ligands
Code	Name		Style	Show	Link
CLT	4-phenyl-butanoic acid				PoSSuM
ZN	Zinc ion				PoSSuM

Non-standard Residues
Code	Name	Show

Glycosylation
Code	Name	Emphasize

Modification
Code	Name	Show

Download interaction data: 5VNN

Code :

5VNN PDBj RCSB PDB PDBe

Header :

PROTEIN TRANSPORT

Title :

Crystal structure of Sec23a/Sec24a/Sec22 complexed with 4-phenylbutyric acid (50mM soaking)

Release Data :

2017-07-05

Compound :

mol_id	molecule	chains	synonym
1	Protein transport protein Sec23A	A	SEC23-related protein A

mol_id	molecule	chains	synonym
2	Protein transport protein Sec24A	B	SEC24-related protein A
	fragment: UNP residues 346-1093

mol_id	molecule	chains	synonym
3	Vesicle-trafficking protein SEC22b	C	ER-Golgi SNARE of 24 kDa,ERS24,SEC22 vesicle-trafficking protein homolog B,SEC22 vesicle-trafficking protein-like 1,mSec22b
	fragment: UNP residues 1-157

Source :

mol_id	organism_scientific	organism_common	expression_system
1	Homo sapiens (taxid:9606)	Human	Insect cell expression vector pTIE1 (taxid:266783)
	gene: SEC23A

mol_id	organism_scientific	organism_common	expression_system
2	Homo sapiens (taxid:9606)	Human	Insect cell expression vector pTIE1 (taxid:266783)
	gene: SEC24A

mol_id	organism_scientific	organism_common	expression_system
3	Mus musculus (taxid:10090)	Mouse	Escherichia coli (taxid:562)
	gene: Sec22b, Sec22l1

Authors :

Ma, W., Goldberg, J.

Keywords :

COPII, Trafficking, p24, ER retention, PROTEIN TRANSPORT

Exp. method :

X-RAY DIFFRACTION ( 2.501 Å )

Citation :

ER retention is imposed by COPII protein sorting and attenuated by 4-phenylbutyrate.

Ma, W.,Goldberg, E.,Goldberg, J.
(2017) Elife 6

PDB ID: 5VNN