Brand  (β version)

PDB ID: 5ULJ

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Ligands
Code Name Style Show Link
CA Calcium ion PoSSuM
0WD [[(2r,3s,4r,5r)-5-(3-aminocarbonyl-4h-pyridin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2r,3s,4r,5r)-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methyl hydrogen phosphate PoSSuM
Non-standard Residues
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Glycosylation
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Structure summary

Code : 5ULJ   PDBj   RCSB PDB   PDBe
Header : HYDROLASE
Title : Crystal structure of Scheffersomyces stipitis Rai1 in complex with (3'-NADP)+ and calcium ion
Release Data : 2017-05-17
Compound :
mol_id molecule chains synonym
1 RAI1 A,B,C,D RAI1
Source :
mol_id organism_scientific organism_common
1 Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)  (taxid:322104) Yeast
Authors : Doamekpor, S.K., Tong, L.
Keywords : hydrolase, NADP
Exp. method : X-RAY DIFFRACTION ( 1.9110 Å )
Citation :

5' End Nicotinamide Adenine Dinucleotide Cap in Human Cells Promotes RNA Decay through DXO-Mediated deNADding.

Jiao, X.,Doamekpor, S.K.,Bird, J.G.  et al.
(2017)  Cell  168 : 1015 - 1027.e10

PubMed: 28283058
DOI: 10.1016/j.cell.2017.02.019

Reaction

Chain : A, B, C, D
UniProt : A3LNL5 (DXO_PICST)
Reaction: EC: Evidence:
Physiological Direction:
a 5'-end NAD(+)-phospho-ribonucleoside in mRNA + H2O = a 5'- end phospho-ribonucleoside in mRNA + H(+) + NAD(+) - UniProtKB:O13836
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a 5'-end (N(7)-methyl 5'-triphosphoguanosine)-ribonucleoside- ribonucleotide in mRNA + H2O = a (N(7)-methyl 5'-triphospho- guanosine)-nucleoside + a 5'-end phospho-ribonucleoside in mRNA + H(+) - UniProtKB:P53063
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