Brand  (β version)

PDB ID: 5TD7

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Ligands
Code Name Style Show Link
1PE Pentaethylene glycol PoSSuM
FKS 7-[(3-aminopropyl)amino]-1,1,1-trifluoroheptane-2,2-diol PoSSuM
K Potassium ion PoSSuM
PO4 Phosphate ion PoSSuM
ZN Zinc ion PoSSuM
Non-standard Residues
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Structure summary

Code : 5TD7   PDBj   RCSB PDB   PDBe
Header : HYDROLASE
Title : Crystal structure of histone deacetylase 10
Release Data : 2017-05-24
Compound :
mol_id molecule chains
1 Zgc:55652 A
Source :
mol_id organism_scientific organism_common expression_system
1 Danio rerio  (taxid:7955) Zebrafish Escherichia coli  (taxid:469008)
gene: hdac10, zgc:55652
expression_system_strain: BL21(de3)
Authors : Hai, Y., Shinsky, S.A., Porter, N.J., Christianson, D.W.
Keywords : hydrolase
Exp. method : X-RAY DIFFRACTION ( 2.850 Å )
Citation :

Histone deacetylase 10 structure and molecular function as a polyamine deacetylase.

Hai, Y.,Shinsky, S.A.,Porter, N.J.  et al.
(2017)  Nat Commun  8 : 15368 - 15368

PubMed: 28516954
DOI: 10.1038/ncomms15368

Reaction

Chain : A
UniProt : Q803K0 (HDA10_DANRE)
Reaction: EC: Evidence:
Physiological Direction:
H2O + N(8)-acetylspermidine = acetate + spermidine 3.5.1.48 PubMed:28516954
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H2O + N-acetylputrescine = acetate + putrescine 3.5.1.62 PubMed:28516954
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H2O + N-acetylcadaverine = acetate + cadaverine - PubMed:28516954
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