Brand  (β version)

PDB ID: 5OL4

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Ligands
Code Name Style Show Link
9XN Phosphoramidothioic O,O-acid PoSSuM
EDO 1,2-ethanediol PoSSuM
NI Nickel (II) ion PoSSuM
SO4 Sulfate ion PoSSuM
Non-standard Residues
Code Name Show
CXM N-carboxymethionine
KCX Lysine nz-carboxylic acid
Glycosylation
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Structure summary

Code : 5OL4   PDBj   RCSB PDB   PDBe
Header : HYDROLASE
Title : 1.28 A resolution of Sporosarcina pasteurii urease inhibited in the presence of NBPT
Release Data : 2018-03-07
Compound :
mol_id molecule chains synonym
1 Urease subunit gamma A Urea amidohydrolase subunit gamma
ec: 3.5.1.5
mol_id molecule chains synonym
2 Urease subunit beta B Urea amidohydrolase subunit beta
ec: 3.5.1.5
mol_id molecule chains synonym
3 Urease subunit alpha C Urea amidohydrolase subunit alpha
ec: 3.5.1.5
Source :
mol_id organism_scientific
1 Sporosarcina pasteurii  (taxid:1474)
atcc: 11859
mol_id organism_scientific
2 Sporosarcina pasteurii  (taxid:1474)
atcc: 11859
mol_id organism_scientific
3 Sporosarcina pasteurii  (taxid:1474)
atcc: 11859
Authors : Mazzei, L., Cianci, M., Musiani, F., Ciurli, S.
Keywords : Urease Nickel NBPT enzyme, HYDROLASE
Exp. method : X-RAY DIFFRACTION ( 1.28 Å )
Citation :

Urease Inhibition in the Presence of N-(n-Butyl)thiophosphoric Triamide, a Suicide Substrate: Structure and Kinetics.

Mazzei, L.,Cianci, M.,Contaldo, U.  et al.
(2017)  Biochemistry  56 : 5391 - 5404

PubMed: 28857549
DOI: 10.1021/acs.biochem.7b00750

Reaction

Chain : A
UniProt : A0A0H3YGY5 (A0A0H3YGY5_SPOPA)
Reaction: EC: Evidence:
Physiological Direction:
2 H(+) + H2O + urea = CO2 + 2 NH4(+) 3.5.1.5 ARBA:ARBA00000242, HAMAP- Rule:MF_00739, RuleBase:RU003850
-
Chain : B
UniProt : P41021 (URE2_SPOPA)
Reaction: EC: Evidence:
Physiological Direction:
2 H(+) + H2O + urea = CO2 + 2 NH4(+) 3.5.1.5 HAMAP-Rule:MF_01954
-
Chain : C
UniProt : A0A0H3YL32 (URE1_SPOPA)
Reaction: EC: Evidence:
Physiological Direction:
2 H(+) + H2O + urea = CO2 + 2 NH4(+) 3.5.1.5 HAMAP-Rule:MF_01953, PubMed:30969470
-