Het-PDB Navi2 (PDB: 5JP1)

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Ligands
Code	Name		Style	Show	Link
D1D	(4s,5s)-1,2-dithiane-4,5-diol				PoSSuM
MLI	Malonate ion				PoSSuM

Non-standard Residues
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Glycosylation
Code	Name	Emphasize

Modification
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AYE	Prop-2-en-1-amine

Download interaction data: 5JP1

Code :

5JP1 PDBj RCSB PDB PDBe

Header :

HYDROLASE

Title :

Structure of Xanthomonas campestris effector protein XopD bound to tomato SUMO

Release Data :

2016-07-27

Compound :

mol_id	molecule	chains
1	Xanthomonas outer protein D	A
	fragment: UNP residues 298-515

mol_id	molecule	chains	synonym
2	Small ubiquitin-related modifier	B	SUMO

Source :

mol_id	organism_scientific	expression_system
1	Xanthomonas campestris pv. vesicatoria (strain 85-10) (taxid:316273)	Escherichia coli (taxid:562)
	gene: xopD, XCV0437

mol_id	organism_scientific	organism_common	expression_system
2	Solanum lycopersicum (taxid:4081)	Tomato	Escherichia coli (taxid:562)
	gene: sumo

Authors :

Pruneda, J.N., Komander, D.

Keywords :

Enzyme, CE clan, Deubiquitinase, DeSUMOylase, hydrolase

Exp. method :

X-RAY DIFFRACTION ( 2.100 Å )

Citation :

The Molecular Basis for Ubiquitin and Ubiquitin-like Specificities in Bacterial Effector Proteases.

Pruneda, J.N.,Durkin, C.H.,Geurink, P.P. et al.
(2016) Mol.Cell 63 : 261 - 276

PDB ID: 5JP1