Het-PDB Navi2 (PDB: 5H6O)

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Ligands
Code	Name		Style	Show	Link
DPM	3-[5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1h-pyrrol-2-yl]methyl}-4-(carboxymethyl)-1h-pyrrol-3-yl]propanoic acid				PoSSuM
MG	Magnesium ion				PoSSuM

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Download interaction data: 5H6O

Code :

5H6O PDBj RCSB PDB PDBe

Header :

TRANSFERASE

Title :

Porphobilinogen deaminase from Vibrio Cholerae

Release Data :

2017-11-15

Compound :

mol_id	molecule	chains	synonym
1	Porphobilinogen deaminase	A	PBG,Hydroxymethylbilane synthase,Pre-uroporphyrinogen synthase
	ec: 2.5.1.61

Source :

mol_id	organism_scientific	expression_system
1	Vibrio cholerae (taxid:666)	Escherichia coli BL21(DE3) (taxid:469008)
	gene: hemC, ERS013197_03721 expression_system_strain: BL21(DE3)

Authors :

Funamizu, T., Chen, M., Tanaka, Y., Ishimori, K., Uchida, T.

Keywords :

heme synthesis protein, porphobilinogen, deaminase, TRANSFERASE

Exp. method :

X-RAY DIFFRACTION ( 2.702 Å )

Citation :

Porphobilinogen deaminase from Vibrio Cholerae

Funamizu, T.,Chen, M.,Tanaka, Y. et al.
To Be Published

Chain :

UniProt :

A0A0H6VB38 (A0A0H6VB38_VIBCL)

Reaction:	EC:	Evidence:
Reaction:	Physiological Direction:	Evidence:
H2O + 4 porphobilinogen = hydroxymethylbilane + 4 NH4(+)	2.5.1.61	ARBA:ARBA00000416, HAMAP- Rule:MF_00260
H2O + 4 porphobilinogen = hydroxymethylbilane + 4 NH4(+)	-	ARBA:ARBA00000416, HAMAP- Rule:MF_00260

PDB ID: 5H6O