Brand  (β version)

PDB ID: 5ALW

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Ligands
Code Name Style Show Link
DMS Dimethyl sulfoxide PoSSuM
JQN 5-[2-(4-methylphenyl)sulfanylethanoyl]-1,3-dihydroindol-2-one PoSSuM
SO4 Sulfate ion PoSSuM
Non-standard Residues
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Glycosylation
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Structure summary

Code : 5ALW   PDBj   RCSB PDB   PDBe
Header : HYDROLASE
Title : ligand complex structure of soluble epoxide hydrolase
Release Data : 2015-05-13
Compound :
mol_id molecule chains synonym
1 BIFUNCTIONAL EPOXIDE HYDROLASE 2 A EPOXIDE HYDRATASE, SOLUBLE EPOXIDE HYDROLASE, SEH
ec: 3.3.2.10, 3.1.3.76
Source :
mol_id organism_scientific organism_common expression_system
1 HOMO SAPIENS  (taxid:9606) HUMAN SPODOPTERA FRUGIPERDA  (taxid:7108)
expression_system_common: FALL ARMYWORM
expression_system_cell_line: SF9
Authors : Oster, L., Tapani, S., Xue, Y., Kack, H.
Keywords : HYDROLASE
Exp. method : X-RAY DIFFRACTION ( 2.20 Å )
Citation :

Successful Generation of Structural Information for Fragment-Based Drug Discovery.

Oster, L.,Tapani, S.,Xue, Y.  et al.
(2015)  Drug Discov Today  20 : 1104

PubMed: 25931264
DOI: 10.1016/J.DRUDIS.2015.04.005

Reaction

Chain : A
UniProt : P34913 (HYES_HUMAN)
Reaction: EC: Evidence:
Physiological Direction:
an epoxide + H2O = an ethanediol 3.3.2.10 PubMed:12574510, PubMed:12869654, PubMed:22798687
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(9S,10S)-10-hydroxy-9-(phosphooxy)octadecanoate + H2O = (9S,10S)-9,10-dihydroxyoctadecanoate + phosphate 3.1.3.76 PubMed:12574508, PubMed:12574510, PubMed:15196990
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12-phosphooxy-(9Z)-octadecenoate + H2O = 12-hydroxy-(9Z)- octadecenoate + phosphate - PubMed:12574510
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12-phosphooxy-(9E)-octadecenoate + H2O = 12-hydroxy-(9E)- octadecenoate + phosphate - PubMed:12574510
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12-(phosphooxy)octadecanoate + H2O = 12-hydroxyoctadecanoate + phosphate - PubMed:12574510
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8,9-epoxy-(5Z,11Z,14Z)-eicosatrienoate + H2O = 8,9-dihydroxy- (5Z,11Z,14Z)-eicosatrienoate - PubMed:22798687
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11,12-epoxy-(5Z,8Z,14Z)-eicosatrienoate + H2O = 11,12- dihydroxy-(5Z,8Z,14Z)-eicosatrienoate - PubMed:22798687
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14,15-epoxy-(5Z,8Z,11Z)-eicosatrienoate + H2O = 14,15- dihydroxy-(5Z,8Z,11Z)-eicosatrienoate - PubMed:22798687
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9,10-epoxy-(12Z)-octadecenoate + H2O = 9,10-dihydroxy-(12Z)- octadecenoate - PubMed:22798687
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8-hydroxy-(11S,12S)-epoxy-(5Z,9E,14Z)-eicosatrienoate + H2O = (8,11R,12S)-trihydroxy-(5Z,9E,14Z)-eicosatrienoate - PubMed:21217101
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10-hydroxy-(11S,12S)-epoxy- (5Z,8Z,14Z)-eicosatrienoate + H2O = (10,11S,12R)-trihydroxy-(5Z,8Z,14Z)-eicosatrienoate - PubMed:21217101
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1-tetradecanoyl-sn-glycerol 3-phosphate + H2O = 1- tetradecanoyl-sn-glycerol + phosphate - PubMed:22387545
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1-octadecanoyl-sn-glycero-3-phosphate + H2O = 1-octadecanoyl- sn-glycerol + phosphate - PubMed:22217705, PubMed:22387545
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1-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-sn-glycero-3-phosphate + H2O = 1-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-sn-glycerol + phosphate - PubMed:22217705, PubMed:22387545
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1-hexadecanoyl-sn-glycero-3-phosphate + H2O = 1-hexadecanoyl- sn-glycerol + phosphate - PubMed:22217705, PubMed:22387545
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1-(9Z-octadecenoyl)-sn-glycero-3-phosphate + H2O = 1-(9Z- octadecenoyl)-sn-glycerol + phosphate - PubMed:22217705, PubMed:22387545
left-to-right PubMed:22217705, PubMed:22387545
(8S,9R)-epoxy-(5Z,11Z,14Z)-eicosatrienoate + H2O = (8S,9S)- dihydroxy-(5Z,11Z,14Z)-eicosatrienoate - UniProtKB:P34914
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(11S,12R)-epoxy-(5Z,8Z,14Z)-eicosatrienoate + H2O = (11R,12R)- dihydroxy-(5Z,8Z,14Z)-eicosatrienoate - UniProtKB:P34914
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(11S,12R)-epoxy-(5Z,8Z,14Z)-eicosatrienoate + H2O = (11S,12S)- dihydroxy-(5Z,8Z,14Z)-eicosatrienoate - UniProtKB:P34914
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(14S,15R)-epoxy-(5Z,8Z,11Z)-eicosatrienoate + H2O = (14R,15R)- dihydroxy-(5Z,8Z,11Z)-eicosatrienoate - UniProtKB:P34914
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(14S,15R)-epoxy-(5Z,8Z,11Z)-eicosatrienoate + H2O = (14S,15S)- dihydroxy-(5Z,8Z,11Z)-eicosatrienoate - UniProtKB:P34914
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(11R,12S)-epoxy-(5Z,8Z,14Z)-eicosatrienoate + H2O = (11S,12S)- dihydroxy-(5Z,8Z,14Z)-eicosatrienoate - UniProtKB:P34914
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(11R,12S)-epoxy-(5Z,8Z,14Z)-eicosatrienoate + H2O = (11R,12R)- dihydroxy-(5Z,8Z,14Z)-eicosatrienoate - UniProtKB:P34914
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(8S,9R)-epoxy-(5Z,11Z,14Z)-eicosatrienoate + H2O = (8R,9R)- dihydroxy-(5Z,11Z,14Z)-eicosatrienoate - UniProtKB:P34914
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(14R,15S)-epoxy-(5Z,8Z,11Z)-eicosatrienoate + H2O = (14R,15R)- dihydroxy-(5Z,8Z,11Z)-eicosatrienoate - UniProtKB:P34914
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