Brand  (β version)

PDB ID: 4E47

Hetero Atom Contents

  The number of atoms exceeds 100,000.
  So, it can not be displayed here.

Select unit:

Select hetatm:   

close
information
centroid:
interaction residue:

Select chain:   Sequence  

Data format:   

Color scheme of protein:

Ligands
Code Name Style Show Link
SAM S-adenosylmethionine PoSSuM
0N6 (R)-(3-(3-cyanophenyl)-1-oxo-1-(pyrrolidin-1-yl)propan-2-yl)-1,2,3,4-tetrahydroisoquinoline-6-sulfonamide PoSSuM
BME Beta-mercaptoethanol PoSSuM
SO4 Sulfate ion PoSSuM
Non-standard Residues
Code Name Show
Glycosylation
Code Name Emphasize
Modification
Code Name Show

Structure summary

Code : 4E47   PDBj   RCSB PDB   PDBe
Header : TRANSFERASE/TRANSFERASE INHIBITOR
Title : SET7/9 in complex with inhibitor (R)-(3-(3-cyanophenyl)-1-oxo-1-(pyrrolidin-1-yl)propan-2-yl)-1,2,3,4-tetrahydroisoquinoline-6- sulfonamide and S-adenosylmethionine
Release Data : 2012-03-28
Compound :
mol_id molecule chains synonym
1 Histone-lysine N-methyltransferase SETD7 A,B,C,D SET7/9, Histone H3-K4 methyltransferase SETD7, H3-K4-HMTase SETD7, Lysine N-methyltransferase 7, SET domain-containing protein 7
ec: 2.1.1.43
fragment: SET domain (UNP residues 109-366)
Source :
mol_id organism_scientific organism_common expression_system
1 Homo sapiens  (taxid:9606) Human Escherichia coli  (taxid:469008)
gene: SETD7, KIAA1717, KMT7, SET7, SET9
expression_system_strain: BL21(DE3)Rosetta2
expression_system_vector_type: plasmid
expression_system_plasmid: PHIS2
Authors : Walker, J.R., Ouyang, H., Dong, A., Fish, P., Cook, A., Barsyte, D., Vedadi, M., Tatlock, J., Owen, D., Bunnage, M., Bountra, C., Weigelt, J., Edwards, A.M., Arrowsmith, C.H., Brown, P.J., Structural Genomics Consortium (SGC)
Keywords : ternary complex, SET domain, methyltransferase, inhibitor, S-adenosylmethionine, chromatin regulator, chromosomal protein, nucleus, transcription, transcription regulation, transferase, Structural Genomics Consortium, SGC, TRANSFERASE-TRANSFERASE INHIBITOR complex
Exp. method : X-RAY DIFFRACTION ( 2.00 Å )
Citation :

Setd7 in Complex with Inhibitor and SAM

Walker, J.R.,Ouyang, H.,Dong, A.  et al.
To be Published 

Reaction

Chain : A, B, C, D
UniProt : Q8WTS6 (SETD7_HUMAN)
Reaction: EC: Evidence:
Physiological Direction:
L-lysyl(4)-[histone H3] + S-adenosyl-L-methionine = H(+) + N(6)-methyl-L-lysyl(4)-[histone H3] + S-adenosyl-L-homocysteine 2.1.1.364 PROSITE-ProRule:PRU00910, PubMed:12540855
-
L-lysyl-[protein] + S-adenosyl-L-methionine = H(+) + N(6)- methyl-L-lysyl-[protein] + S-adenosyl-L-homocysteine - PubMed:15099517, PubMed:15525938, PubMed:16415881
left-to-right