Brand  (β version)

PDB ID: 4G0R

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Ligands
Code Name Style Show Link
CL Chloride ion PoSSuM
DC 2'-deoxycytidine-5'-monophosphate PoSSuM
EDO 1,2-ethanediol PoSSuM
MG Magnesium ion PoSSuM
NA Sodium ion PoSSuM
Non-standard Residues
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Structure summary

Code : 4G0R   PDBj   RCSB PDB   PDBe
Header : virus/dna
Title : Structural characterization of H-1 Parvovirus: comparison of infectious virions to replication defective particles
Release Data : 2013-02-27
Compound :
mol_id molecule chains synonym
1 Capsid protein VP1 A Coat protein VP1
mol_id molecule chains
2 DNA (5'-D(P*CP*TP*GP*AP*CP*TP*TP*CP*AP*A)-3') C
Source :
mol_id organism_scientific
1 H-1 parvovirus  (taxid:10799)
mol_id organism_scientific
2 H-1 PARVOVIRUS  (taxid:10799)
Authors : Halder, S., Agbandje-McKenna, M., Nam, H.-J., Govindasamy, L., Vogel, M., Dinsart, C., Salome, N., McKenna, R.
Keywords : Beta-barrel, ssDNA binding, ssDNA, icosahedral virus, virus, virus capsid protein, cell, virus-dna complex
Exp. method : X-RAY DIFFRACTION ( 2.7000 Å )
Citation :

Structural characterization of h-1 parvovirus: comparison of infectious virions to empty capsids.

Halder, S.,Nam, H.J.,Govindasamy, L.  et al.
(2013)  J.Virol.  87 : 5128 - 5140

PubMed: 23449783
DOI: 10.1128/JVI.03416-12

Reaction

Chain : A
UniProt : P03136 (CAPSD_PAVHH)
Reaction : -