Brand  (β version)

color scheme of protein:


interaction residue:


Code Name Link
0TT 1-[(2r,4s,5r)-5-(hydroxymethyl)-4-oxidanyl-oxolan-2-yl]-5-[[(5r)-1-[(2r,4s,5r)-5-(hydroxymethyl)-4-oxidanyl-oxolan-2-yl]-5-methyl-2,4-bis(oxidanylidene)-1,3-diazinan-5-yl]methyl]pyrimidine-2,4-dione
EEM [(3s)-3-amino-4-hydroxy-4-oxo-butyl]-[[(2s,3s,4r,5r)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl]-methyl-selanium
POP Pyrophosphate 2-
SF4 Iron/sulfur cluster
SO4 Sulfate ion
Code : 4FHD   PDBj   RCSB PDB   PDBe
Header : LYASE
Title : Spore photoproduct lyase complexed with dinucleoside spore photoproduct
Release Data : 2012-07-18
Compound :
mol_id molecule chains
1 Spore photoproduct lyase A
Source :
mol_id organism_scientific expression_system
1 Geobacillus thermodenitrificans  (taxid:420246) Escherichia coli  (taxid:562)
strain: NG80-2
gene: GTNG_2348
expression_system_strain: BL21(DE-3)
expression_system_vector_type: plasmid
expression_system_plasmid: modified pETM11
Authors : Benjdia, A., Heil, K., Barends, T.R.M., Carell, T., Schlichting, I.
Keywords : partial TIM-barrel, DNA repair, damaged DNA, lyase
Exp. method : X-RAY DIFFRACTION ( 2.00 Å )
Citation :

Structural insights into recognition and repair of UV-DNA damage by Spore Photoproduct Lyase, a radical SAM enzyme.

Benjdia, A.,Heil, K.,Barends, T.R.  et al.
(2012)  Nucleic Acids Res.  40 : 9308 - 9318

PubMed: 22761404
DOI: 10.1093/nar/gks603

Chain : A
UniProt : A4IQU1 (No found in current UniProtKB/SwissProt)
Reaction : -