Het-PDB Navi2 (PDB: 4FHD)

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Ligands
Code	Name	Link
0TT	1-[(2r,4s,5r)-5-(hydroxymethyl)-4-oxidanyl-oxolan-2-yl]-5-[[(5r)-1-[(2r,4s,5r)-5-(hydroxymethyl)-4-oxidanyl-oxolan-2-yl]-5-methyl-2,4-bis(oxidanylidene)-1,3-diazinan-5-yl]methyl]pyrimidine-2,4-dione	PoSSuM
EEM	[(3s)-3-amino-4-hydroxy-4-oxo-butyl]-[[(2s,3s,4r,5r)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl]-methyl-selanium	PoSSuM
POP	Pyrophosphate 2-	PoSSuM
SF4	Iron/sulfur cluster	PoSSuM
SO4	Sulfate ion	PoSSuM

Non-standard Residues
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Download interaction data: 4FHD

Code :

4FHD PDBj RCSB PDB PDBe

Header :

LYASE

Title :

Spore photoproduct lyase complexed with dinucleoside spore photoproduct

Release Data :

2012-07-18

Compound :

mol_id	molecule	chains
1	Spore photoproduct lyase	A

Source :

mol_id	organism_scientific	expression_system
1	Geobacillus thermodenitrificans (taxid:420246)	Escherichia coli (taxid:562)
	strain: NG80-2 gene: GTNG_2348 expression_system_strain: BL21(DE-3) expression_system_vector_type: plasmid expression_system_plasmid: modified pETM11

Authors :

Benjdia, A., Heil, K., Barends, T.R.M., Carell, T., Schlichting, I.

Keywords :

partial TIM-barrel, DNA repair, damaged DNA, lyase

Exp. method :

X-RAY DIFFRACTION ( 2.00 Å )

Citation :

Structural insights into recognition and repair of UV-DNA damage by Spore Photoproduct Lyase, a radical SAM enzyme.

Benjdia, A.,Heil, K.,Barends, T.R. et al.
(2012) Nucleic Acids Res. 40 : 9308 - 9318

PDB ID: 4FHD