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Ligands
Code Name Style Show Link
MG Magnesium ion
SRY Streptomycin
ZN Zinc ion
Non-standard Residues
Code Name Show
0TD (3s)-3-(methylsulfanyl)-L-aspartic acid
2MG 2n-methylguanosine-5'-monophosphate
4OC 4n,o2'-methylcytidine-5'-monophosphate
5MC 5-methylcytidine-5'-monophosphate
7MG 7n-methyl-8-hydroguanosine-5'-monophosphate
M2G N2-dimethylguanosine-5'-monophosphate
MA6 6n-dimethyladenosine-5'-monophoshate
PSU Pseudouridine-5'-monophosphate
UR3 3-methyluridine-5'-monophoshate
Glycosylation
Code Name Emphasize
Modification
Code Name Show
Code : 4DUZ   PDBj   RCSB PDB   PDBe
Header : RIBOSOME/ANTIBIOTIC
Title : Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, U13C, bound with streptomycin
Release Data : 2013-02-27
Compound :
mol_id molecule chains
1 16S rRNA A
mutation: U13C
mol_id molecule chains
2 ribosomal protein S2 B
mol_id molecule chains
3 ribosomal protein S3 C
mol_id molecule chains
4 ribosomal protein S4 D
mol_id molecule chains
5 ribosomal protein S5 E
mol_id molecule chains
6 ribosomal protein S6 F
mol_id molecule chains
7 ribosomal protein S7 G
mol_id molecule chains
8 ribosomal protein S8 H
mol_id molecule chains
9 ribosomal protein S9 I
mol_id molecule chains
10 ribosomal protein S10 J
mol_id molecule chains
11 ribosomal protein S11 K
mol_id molecule chains
12 ribosomal protein S12 L
mol_id molecule chains
13 ribosomal protein S13 M
mol_id molecule chains
14 ribosomal protein S14 N
mol_id molecule chains
15 ribosomal protein S15 O
mol_id molecule chains
16 ribosomal protein S16 P
mol_id molecule chains
17 ribosomal protein S17 Q
mol_id molecule chains
18 ribosomal protein S18 R
mol_id molecule chains
19 ribosomal protein S19 S
mol_id molecule chains
20 ribosomal protein S20 T
mol_id molecule chains
21 ribosomal protein THX U
Source :
mol_id organism_scientific
1 Thermus thermophilus  (taxid:300852)
strain: HB8
mol_id organism_scientific
2 Thermus thermophilus  (taxid:300852)
strain: HB8
mol_id organism_scientific
3 Thermus thermophilus  (taxid:300852)
strain: HB8
mol_id organism_scientific
4 Thermus thermophilus  (taxid:300852)
strain: HB8
mol_id organism_scientific
5 Thermus thermophilus  (taxid:300852)
strain: HB8
mol_id organism_scientific
6 Thermus thermophilus  (taxid:300852)
strain: HB8
mol_id organism_scientific
7 Thermus thermophilus  (taxid:300852)
strain: HB8
mol_id organism_scientific
8 Thermus thermophilus  (taxid:300852)
strain: HB8
mol_id organism_scientific
9 Thermus thermophilus  (taxid:300852)
strain: HB8
mol_id organism_scientific
10 Thermus thermophilus  (taxid:300852)
strain: HB8
mol_id organism_scientific
11 Thermus thermophilus  (taxid:300852)
strain: HB8
mol_id organism_scientific
12 Thermus thermophilus  (taxid:300852)
strain: HB8
mol_id organism_scientific
13 Thermus thermophilus  (taxid:300852)
strain: HB8
mol_id organism_scientific
14 Thermus thermophilus  (taxid:300852)
strain: HB8
mol_id organism_scientific
15 Thermus thermophilus  (taxid:300852)
strain: HB8
mol_id organism_scientific
16 Thermus thermophilus  (taxid:300852)
strain: HB8
mol_id organism_scientific
17 Thermus thermophilus  (taxid:300852)
strain: HB8
mol_id organism_scientific
18 Thermus thermophilus  (taxid:300852)
strain: HB8
mol_id organism_scientific
19 Thermus thermophilus  (taxid:300852)
strain: HB8
mol_id organism_scientific
20 Thermus thermophilus  (taxid:300852)
strain: HB8
mol_id organism_scientific
21 Thermus thermophilus  (taxid:300852)
strain: HB8
Authors : Demirci, H., Murphy IV, F., Murphy, E., Gregory, S.T., Dahlberg, A.E., Jogl, G.
Keywords : decoding, Streptomycin, RNA structure, antibiotic resistance, RIBOSOME-ANTIBIOTIC complex
Exp. method : X-RAY DIFFRACTION ( 3.651 Å )
Citation :

A structural basis for streptomycin resistance

Demirci, H.,Murphy IV, F.,Murphy, E.  et al.
To be Published 

Chain : B
UniProt : P80371 (RS2_THET8)
Reaction : -
Chain : C
UniProt : P80372 (RS3_THET8)
Reaction : -
Chain : D
UniProt : P80373 (RS4_THET8)
Reaction : -
Chain : E
UniProt : Q5SHQ5 (RS5_THET8)
Reaction : -
Chain : F
UniProt : Q5SLP8 (RS6_THET8)
Reaction : -
Chain : G
UniProt : P17291 (RS7_THET8)
Reaction : -
Chain : H
UniProt : Q5SHQ2 (RS8_THET8)
Reaction : -
Chain : I
UniProt : P80374 (RS9_THET8)
Reaction : -
Chain : J
UniProt : Q5SHN7 (RS10_THET8)
Reaction : -
Chain : K
UniProt : P80376 (RS11_THET8)
Reaction : -
Chain : L
UniProt : F6DEQ7 (F6DEQ7_THETG)
Reaction : -
Chain : M
UniProt : P80377 (RS13_THET8)
Reaction : -
Chain : N
UniProt : Q5SHQ1 (RS14Z_THET8)
Reaction : -
Chain : O
UniProt : Q5SJ76 (RS15_THET8)
Reaction : -
Chain : P
UniProt : Q5SJH3 (RS16_THET8)
Reaction : -
Chain : Q
UniProt : Q5SHP7 (RS17_THET8)
Reaction : -
Chain : R
UniProt : Q5SLQ0 (RS18_THET8)
Reaction : -
Chain : S
UniProt : Q5SHP2 (RS19_THET8)
Reaction : -
Chain : T
UniProt : P80380 (RS20_THET8)
Reaction : -
Chain : U
UniProt : Q5SIH3 (RSHX_THET8)
Reaction : -