Brand  (β version)

color scheme of protein:


interaction residue:

chain: Hide other chain(s)

Code Name Link
0LN 13-cyclohexyl-3-methoxy-17,22-dimethyl-7h-10,6-(methanoiminothioiminobutanoiminomethano)indolo[2,1-a][2]benzazepine-14,23-dione 16,16-dioxide
GOL Glycerol
SO4 Sulfate ion
Code : 4DRU
Header : Transferase/Inhibitor
Title : HCV NS5B in complex with macrocyclic INDOLE INHIBITOR
Release Data : 2012-04-18
Compound :
mol_id molecule chains synonym
1 RNA-directed RNA polymerase A,B NS5B, p68
fragment: UNP residues 2420-2982
Source :
mol_id organism_scientific organism_common expression_system
1 Hepatitis C virus  (taxid:420174) HCV Escherichia coli  (taxid:562)
strain: HC-J4
expression_system_strain: Rosetta 2(DE3)
expression_system_plasmid: pet21b
Authors : Cummings, M.D., Vendeville, S.
Keywords : HCV POLYMERASE, macrocycle inhibitor, thumb domain, Transferase-Inhibitor complex
Exp. method : X-RAY DIFFRACTION ( 2.10 Å )
Citation :

Structure-based macrocyclization yields hepatitis C virus NS5B inhibitors with improved binding affinities and pharmacokinetic properties.

Cummings, M.D.,Lin, T.I.,Hu, L.  et al.
(2012)  Angew.Chem.Int.Ed.Engl.  51 : 4637 - 4640

PubMed: 22473861
DOI: 10.1002/anie.201200110

Chain : A, B
UniProt : O92972 (POLG_HCVJ4)
Reaction : Hydrolysis of four peptide bonds in the viral precursor polyprotein, commonly with Asp or Glu in the P6 position, Cys or Thr in P1 and Ser or Ala in P1'.
Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1).
NTP + H(2)O = NDP + phosphate.
ATP + H(2)O = ADP + phosphate.