Brand  (β version)

PDB ID: 442D

Hetero Atom Contents

  The number of atoms exceeds 100,000.
  So, it can not be displayed here.

Select unit:

Select hetatm:   

close
information
centroid:
interaction residue:

Select chain:   Sequence  

Data format:   

Color scheme of protein:

Ligands
Code Name Style Show Link
IB 2'-(3-iodo-4-methoxyphenyl)-5-(4-methyl-1-piperazinyl)-2,5'-bi-benzimidazole PoSSuM
MG Magnesium ion PoSSuM
Non-standard Residues
Code Name Show
Glycosylation
Code Name Emphasize
Modification
Code Name Show

Structure summary

Code : 442D   PDBj   RCSB PDB   PDBe
Header : DNA
Title : 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3', BENZIMIDAZOLE DERIVATIVE COMPLEX
Release Data : 2000-02-02
Compound :
mol_id molecule chains
1 DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3') A,B
Source :
mol_id organism_scientific
1
synthetic: yes
Authors : Clark, G.R., Squire, C.J., Martin, R.F., White, J.
Keywords : B-DNA, MINOR GROOVE BINDING, DNA
Exp. method : X-RAY DIFFRACTION ( 1.6 Å )
Citation :

Structures of m-iodo Hoechst-DNA complexes in crystals with reduced solvent content: implications for minor groove binder drug design.

Squire, C.J.,Baker, L.J.,Clark, G.R.  et al.
(2000)  Nucleic Acids Res.  28 : 1252 - 1258

PubMed: 10666470
DOI: 10.1093/nar/28.5.1252

Intermolecular interactions and water structure in a condensed phase B-DNA crystal

Clark, G.R.,Squire, C.J.,Baker, L.J.  et al.
(2000)  Nucleic Acids Res.  28 : 1259 - 1265

DOI: 10.1093/nar/28.5.1259