Brand  (β version)

PDB ID: 3WKX

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Ligands
Code Name Style Show Link
ZN Zinc ion PoSSuM
FUB Beta-L-arabinofuranose PoSSuM
Non-standard Residues
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Glycosylation
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Structure summary

Code : 3WKX   PDBj   RCSB PDB   PDBe
Header : HYDROLASE
Title : Crystal structure of GH127 beta-L-arabinofuranosidase HypBA1 from Bifidobacterium longum arabinose complex form
Release Data : 2014-04-30
Compound :
mol_id molecule chains synonym
1 Non-reducing end beta-L-arabinofuranosidase A Beta-L-arabinofuranosidase HypBA1
ec: 3.2.1.185
Source :
mol_id organism_scientific expression_system
1 Bifidobacterium longum  (taxid:565042) Escherichia coli  (taxid:562)
strain: JCM 1217
gene: hypBA1
expression_system_strain: C43 (DE3)
expression_system_vector_type: PLASMID
expression_system_plasmid: pET-23b
Authors : Ito, T., Saikawa, K., Arakawa, T., Wakagi, T., Fujita, K.
Keywords : (alpha/alpha)6 barrel, Hydrolase, Intracellular
Exp. method : X-RAY DIFFRACTION ( 2.00 Å )
Citation :

Crystal structure of glycoside hydrolase family 127 beta-l-arabinofuranosidase from Bifidobacterium longum.

Ito, T.,Saikawa, K.,Kim, S.  et al.
(2014)  Biochem.Biophys.Res.Commun.  447 : 32 - 37

PubMed: 24680821
DOI: 10.1016/j.bbrc.2014.03.096

Characterization of a novel beta-L-arabinofuranosidase in Bifidobacterium longum: functional elucidation of a DUF1680 protein family member

Fujita, K.,Takashi, Y.,Obuchi, E.  et al.
(2014)  J.Biol.Chem.  289 : 5240 - 5249

PubMed: 24385433
DOI: 10.1074/jbc.M113.528711

Reaction

Chain : A
UniProt : E8MGH8 (HYBA1_BIFL2)
Reaction: EC: Evidence:
Physiological Direction:
beta-L-arabinofuranosyl-(1->2)-beta-L-arabinofuranose + H2O = 2 beta-L-arabinofuranose 3.2.1.185 PubMed:24385433
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