Brand  (β version)

PDB ID: 3SD8

Hetero Atom Contents

  The number of atoms exceeds 100,000.
  So, it can not be displayed here.

Select unit:

Select chain:   Sequence  

Data format:   

Color scheme of protein:

Ligands
Code Name Style Show Link
SR Strontium ion PoSSuM
Non-standard Residues
Code Name Show
F4H 1,5-anhydro-2,3-dideoxy-3-fluoro-2-(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2h)-yl)-6-O-phosphono-D-mannitol
Glycosylation
Code Name Emphasize
Modification
Code Name Show

Structure summary

Code : 3SD8   PDBj   RCSB PDB   PDBe
Header : DNA
Title : Crystal structure of Ara-FHNA decamer DNA
Release Data : 2012-08-29
Compound :
mol_id molecule chains
1 5'-D(*GP*CP*GP*TP*AP*(F4H)P*AP*CP*GP*C)-3' A,B
other_details: Ara-3'-fluoro hexitol (Ara-FHNA) modified DNA decamer
Source :
mol_id organism_scientific
1
synthetic: yes
Authors : Egli, M., Pallan, P.S.
Keywords : A-form DNA, Ara-3'-fluoro hexitol nucleic acid, Ara-FHNA, antisense oligonucleotides, DNA
Exp. method : X-RAY DIFFRACTION ( 1.67 Å )
Citation :

Structural Origins of Opposite Effects on Stability by Axial and Equatorial 3'-Fluoro Modifications of Hexitol Nucleic Acid (HNA)

Egli, M.,Pallan, P.S.,Allerson, C.R.  et al.
To be Published