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Ligands
Code Name Style Show Link
06C Iodomethane
COM 1-thioethanesulfonic acid
EDO 1,2-ethanediol
F43 Factor 430
K Potassium ion
MG Magnesium ion
TP7 Coenzyme B
TXZ O-phosphono-N-(6-sulfanylhexanoyl)-L-threonine
Non-standard Residues
Code Name Show
AGM 5-methyl-arginine
GL3 Thioglycin
MGN 2-methyl-glutamine
MHS N1-methylated histidine
SMC S-methylcysteine
Glycosylation
Code Name Emphasize
Modification
Code Name Show
Code : 3POT   PDBj   RCSB PDB   PDBe
Header : TRANSFERASE
Title : Structural analysis of a Ni(III)-methyl species in methyl-coenzyme M reductase from Methanothermobacter marburgensis
Release Data : 2011-04-13
Compound :
mol_id molecule chains synonym
1 Methyl-coenzyme M reductase I subunit alpha A,D MCR I alpha, Coenzyme-B sulfoethylthiotransferase alpha
ec: 2.8.4.1
mol_id molecule chains synonym
2 Methyl-coenzyme M reductase I subunit beta B,E MCR I beta, Coenzyme-B sulfoethylthiotransferase beta
ec: 2.8.4.1
mol_id molecule chains synonym
3 Methyl-coenzyme M reductase I subunit gamma C,F MCR I gamma, Coenzyme-B sulfoethylthiotransferase gamma
ec: 2.8.4.1
Source :
mol_id organism_scientific organism_common
1 Methanothermobacter marburgensis  (taxid:145263) Methanobacterium thermoautotrophicum
mol_id organism_scientific organism_common
2 Methanothermobacter marburgensis  (taxid:145263) Methanobacterium thermoautotrophicum
mol_id organism_scientific organism_common
3 Methanothermobacter marburgensis  (taxid:145263) Methanobacterium thermoautotrophicum
Authors : Cedervall, P.E., Wilmot, C.M.
Keywords : METAL-BINDING, NICKEL, METHYL-COENZYME M REDUCTASE, METHANOGENESIS, METHYLATION, TRANSFERASE
Exp. method : X-RAY DIFFRACTION ( 1.20 Å )
Citation :

Structural Analysis of a Ni-Methyl Species in Methyl-Coenzyme M Reductase from Methanothermobacter marburgensis.

Cedervall, P.E.,Dey, M.,Li, X.  et al.
(2011)  J.Am.Chem.Soc.  133 : 5626 - 5628

PubMed: 21438550
DOI: 10.1021/ja110492p

Chain : A, D
UniProt : P11558 (MCRA_METTM)
Reaction: EC: Evidence:
Physiological Direction:
coenzyme B + methyl-coenzyme M = coenzyme M-coenzyme B heterodisulfide + methane 2.8.4.1 PubMed:2269306, PubMed:25691570, PubMed:27140643, PubMed:3350018
left-to-right PubMed:27140643, PubMed:3350018
Chain : B, E
UniProt : P11560 (MCRB_METTM)
Reaction: EC: Evidence:
Physiological Direction:
coenzyme B + methyl-coenzyme M = coenzyme M-coenzyme B heterodisulfide + methane 2.8.4.1 PubMed:2269306, PubMed:25691570, PubMed:27140643, PubMed:3350018
left-to-right PubMed:27140643, PubMed:3350018
Chain : C, F
UniProt : P11562 (MCRG_METTM)
Reaction: EC: Evidence:
Physiological Direction:
coenzyme B + methyl-coenzyme M = coenzyme M-coenzyme B heterodisulfide + methane 2.8.4.1 PubMed:2269306, PubMed:25691570, PubMed:27140643, PubMed:3350018
left-to-right PubMed:27140643, PubMed:3350018