Brand  (β version)

PDB ID: 3EEU

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Ligands
Code Name Style Show Link
ACT Acetate ion PoSSuM
CL Chloride ion PoSSuM
HO Holmium atom PoSSuM
Non-standard Residues
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Glycosylation
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Structure summary

Code : 3EEU   PDBj   RCSB PDB   PDBe
Header : HYDROLASE
Title : Structure of the RNA pyrophosphohydrolase BdRppH in complex with Holmium
Release Data : 2009-03-24
Compound :
mol_id molecule chains
1 Probable pyrophosphohydrolase A,B
ec: 3.6.1.-
Source :
mol_id organism_scientific expression_system
1 Bdellovibrio bacteriovorus  (taxid:959) Escherichia coli  (taxid:562)
strain: HD100
gene: mutT, Bd0714
expression_system_strain: BL21(DE3)
expression_system_vector_type: plasmid
expression_system_plasmid: pET24a
Authors : Messing, S.A., Gabelli, S.B., Amzel, L.M.
Keywords : Nudix, RNA pyrophosphohydrolase, Hydrolase
Exp. method : X-RAY DIFFRACTION ( 2.000 Å )
Citation :

Structure and Biological Function of the RNA Pyrophosphohydrolase BdRppH from Bdellovibrio bacteriovorus.

Messing, S.A.,Gabelli, S.B.,Liu, Q.  et al.
(2009)  Structure  17 : 472 - 481

PubMed: 19278661
DOI: 10.1016/j.str.2008.12.022

Reaction

Chain : A, B
UniProt : Q6MPX4 (Q6MPX4_BDEBA)
Reaction: EC: Evidence:
Physiological Direction:
8-oxo-GTP + H2O = 8-oxo-GMP + diphosphate + H(+) - ARBA:ARBA00036904
-
8-oxo-dGTP + H2O = 8-oxo-dGMP + diphosphate + H(+) 3.6.1.55 ARBA:ARBA00035861
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Cofactor: Evidence: Note:
Mg(2+) ECO:0000256 | ARBA:ARBA00001946
ECO:0000256 | PIRSR:PIRSR603561-2
-