Brand  (β version)

PDB ID: 3VMI

Hetero Atom Contents

  The number of atoms exceeds 100,000.
  So, it can not be displayed here.

Select unit:

Select hetatm:   

close
information
centroid:
interaction residue:

Select chain:   Sequence  

Data format:   

Color scheme of protein:

Ligands
Code Name Style Show Link
9CA 9h-carbazole PoSSuM
FE2 Fe (II) ion PoSSuM
FES Fe2/s2 (inorganic) cluster PoSSuM
OXY Oxygen molecule PoSSuM
Non-standard Residues
Code Name Show
Glycosylation
Code Name Emphasize
Modification
Code Name Show

Structure summary

Code : 3VMI   PDBj   RCSB PDB   PDBe
Header : OXIDOREDUCTASE
Title : Carbazole- and oxygen-bound complex between oxygenase and ferredoxin in carbazole 1,9a-dioxygenase
Release Data : 2012-08-22
Compound :
mol_id molecule chains
1 Terminal oxygenase component of carbazole A,B,C
ec: 1.14.12.22
mol_id molecule chains synonym
2 Ferredoxin component of carbazole D,E,F Ferredoxin component of carbazole 1,9a-dioxygenase
ec: 1.14.12.22
Source :
mol_id organism_scientific expression_system
1 Janthinobacterium  (taxid:213804) Escherichia coli  (taxid:562)
strain: J3
gene: carAa
expression_system_strain: BL21(DE3)
expression_system_vector_type: plasmid
expression_system_plasmid: pEJ3AaC
mol_id organism_scientific expression_system
2 Pseudomonas resinovorans  (taxid:53412) Escherichia coli  (taxid:562)
strain: CA10
gene: carAc
expression_system_strain: BL21(DE3)
expression_system_vector_type: plasmid
expression_system_plasmid: pECAC1
Authors : Ashikawa, Y., Nojiri, H.
Keywords : Catalytic mechanism, Electron transfer complex, Rieske nonheme iron oxygenase system, Terminal oxygenase, Rieske-type ferredoxin, carbazole 1, 9a-dioxygenase, OXIDOREDUCTASE
Exp. method : X-RAY DIFFRACTION ( 2.00 Å )
Citation :

Structural insight into the substrate- and dioxygenbinding manner in the catalytic cycle of rieske nonheme iron oxygenase system, carbazole 1,9adioxygenase

Ashikawa, Y.,Fujimoto, Z.,Usami, Y.  et al.
(2012)  Bmc Struct.Biol.  12 : 15 - 15

PubMed: 22727022
DOI: 10.1186/1472-6807-12-15

Reaction

Chain : A, B, C
UniProt : Q84II6 (Q84II6_JANS3)
Reaction : -
Chain : D, E, F
UniProt : Q8GI16 (CARAC_PSERE)
Reaction : -