Brand  (β version)

color scheme of protein:

hetatm:

x
information
centroid:
interaction residue:

chain: Hide other chain(s)

Ligands
Code Name Link
08E 1-[(2-aminopyridin-4-yl)methyl]-5-chloro-3-(2-oxo-1,2-dihydropyridin-3-yl)-1h-indole-2-carboxylic acid
PO4 Phosphate ion
Code : 3U4O
Header : TRANSFERASE/TRANSFERASE INHIBITOR
Title : Novel HCV NS5B polymerase Inhibitors: Discovery of Indole C2 Acyl sulfonamides
Release Data : 2011-12-07
Compound :
mol_id molecule chains synonym
1 RNA-directed RNA polymerase A,B NS5B RNA-dependent RNA polymerase, p68
ec: 2.7.7.48
fragment: UNP residues 2420-2989
Source :
mol_id organism_scientific organism_common expression_system
1 Hepatitis C virus  (taxid:420174) HCV Escherichia coli  (taxid:562)
strain: HC-J4
gene: NS5B
Authors : Anilkumar, G.N., Selyutin, O., Rosenblum, S.B., Zeng, Q., Jiang, Y., Chan, T.-Y., Pu, H., Wang, L., Bennett, F., Chen, K.X., Lesburg, C.A., Duca, J.S., Gavalas, S., Huang, Y., Pinto, P., Sannigrahi, M., Velazquez, F., Venkataraman, S., Vilbubhan, B., Agrawal, S., Ferrari, E., Jiang, C.-K., Huang, H.-C., Shih, N.-Y., Njoroge, F.G., Kozlowski, J.A.
Keywords : nucleotidyl transfer, TRANSFERASE-TRANSFERASE INHIBITOR complex
Exp. method : X-RAY DIFFRACTION ( 1.77 Å )
Citation :

II. Novel HCV NS5B polymerase inhibitors: Discovery of indole C2 acyl sulfonamides.

Anilkumar, G.N.,Selyutin, O.,Rosenblum, S.B.  et al.
(2012)  Bioorg.Med.Chem.Lett.  22 : 713 - 717

PubMed: 22104146
DOI: 10.1016/j.bmcl.2011.10.041

Chain : A, B
UniProt : O92972 (POLG_HCVJ4)
Reaction : Hydrolysis of four peptide bonds in the viral precursor polyprotein, commonly with Asp or Glu in the P6 position, Cys or Thr in P1 and Ser or Ala in P1'.
Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1).
NTP + H(2)O = NDP + phosphate.
ATP + H(2)O = ADP + phosphate.