Brand  (β version)

PDB ID: 3U0P

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Ligands
Code Name Style Show Link
LSC (4r,7r,18e)-4,7-dihydroxy-N,N,N-trimethyl-10-oxo-3,5,9-trioxa-4-phosphaheptacos-18-en-1-aminium 4-oxide PoSSuM
HEX Hexane PoSSuM
SO4 Sulfate ion PoSSuM
GOL Glycerol PoSSuM
UND Undecane PoSSuM
Non-standard Residues
Code Name Show
Glycosylation
Code Name Emphasize
NAG 2-acetamido-2-deoxy-beta-D-glucopyranose
FUC Alpha-L-fucopyranose
Modification
Code Name Show

Structure summary

Code : 3U0P   PDBj   RCSB PDB   PDBe
Header : IMMUNE SYSTEM
Title : Crystal structure of human CD1d-lysophosphatidylcholine
Release Data : 2012-04-25
Compound :
mol_id molecule chains synonym
1 Antigen-presenting glycoprotein CD1d A,C,E R3G1
mutation: N42Q, N108Q, N163Q
mol_id molecule chains synonym
2 Beta-2-microglobulin B,D,F Beta-2-microglobulin form pI 5.3
Source :
mol_id organism_scientific organism_common expression_system
1 Homo sapiens  (taxid:9606) Human Trichoplusia ni  (taxid:7111)
gene: CD1D
mol_id organism_scientific organism_common expression_system
2 Homo sapiens  (taxid:9606) Human Trichoplusia ni  (taxid:7111)
gene: B2M, CDABP0092, HDCMA22P
Authors : Lopez-Sagaseta, J., Sibener, L.V., Adams, E.J.
Keywords : Antigen presentation, Natura Killer T cell receptor, Cell surface, IMMUNE SYSTEM
Exp. method : X-RAY DIFFRACTION ( 2.8 Å )
Citation :

Lysophospholipid presentation by CD1d and recognition by a human Natural Killer T-cell receptor.

Lopez-Sagaseta, J.,Sibener, L.V.,Kung, J.E.  et al.
(2012)  Embo J.  31 : 2047 - 2059

PubMed: 22395072
DOI: 10.1038/emboj.2012.54

Reaction

Chain : A, C, E
UniProt : P15813 (CD1D_HUMAN)
Reaction : -
Chain : B, D, F
UniProt : P61769 (B2MG_HUMAN)
Reaction : -