Het-PDB Navi2 (PDB: 3P4A)

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Ligands
Code	Name		Style	Show	Link
SR	Strontium ion				PoSSuM
MG	Magnesium ion				PoSSuM

Non-standard Residues
Code	Name	Show
CFZ	2'-deoxy-2'-fluorocytidine 5'-(dihydrogen phosphate)
GF2	2'-deoxy-2'-fluoroguanosine 5'-(dihydrogen phosphate)
AF2	2'-deoxy-2'-fluoroadenosine 5'-(dihydrogen phosphate)
UFT	2'-deoxy-2'-fluorouridine 5'-(dihydrogen phosphate)

Glycosylation
Code	Name	Emphasize

Modification
Code	Name	Show

Download interaction data: 3P4A

Code :

3P4A PDBj RCSB PDB PDBe

Header :

RNA

Title :

2'Fluoro modified RNA octamer fA2U2

Release Data :

2011-01-05

Compound :

mol_id	molecule	chains
1	2'Fluoro modified RNA 8-MER	A,B,C,D,E,F

Source :

mol_id	organism_scientific
1
	synthetic: yes other_details: Chemically synthesized modified RNA

Authors :

Manoharan, M., Akinc, A., Pandey, R.K., Qin, J., Hadwiger, P., John, M., Mills, K., Charisse, K., Maier, M.A., Nechev, L., Greene, E.M., Pallan, P.S., Rozners, E., Rajeev, K.G., Egli, M.

Keywords :

RNA, 2'-FLUORO-RNA, O2'-MODIFICATION, OCTAMER, 2'-fluoro 2'-deoxycytidine, 2'-fluoro 2'-deoxyguanosine, 2'-fluoro 2'-deoxyadenosine, 2'-fluoro 2'-deoxyuridine, siRNA

Exp. method :

X-RAY DIFFRACTION ( 1.20 Å )

Citation :

Unexpected origins of the enhanced pairing affinity of 2'-fluoro-modified RNA.

Pallan, P.S.,Greene, E.M.,Jicman, P.A. et al.
(2011) Nucleic Acids Res. 39 : 3482 - 3495

PubMed: 21183463
DOI: 10.1093/nar/gkq1270

PDB ID: 3P4A

Hetero Atom Contents

Structure summary