Brand  (β version)

PDB ID: 3M8Z

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Ligands
Code Name Style Show Link
MN Manganese (II) ion PoSSuM
TRS 2-amino-2-hydroxymethyl-propane-1,3-diol PoSSuM
ACT Acetate ion PoSSuM
GOL Glycerol PoSSuM
HSX 5-O-phosphono-alpha-D-ribofuranose PoSSuM
Non-standard Residues
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TPO Phosphothreonine
Glycosylation
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Modification
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Structure summary

Code : 3M8Z   PDBj   RCSB PDB   PDBe
Header : ISOMERASE
Title : Phosphopentomutase from Bacillus cereus bound with ribose-5-phosphate
Release Data : 2010-12-29
Compound :
mol_id molecule chains synonym
1 Phosphopentomutase A,B,C Phosphodeoxyribomutase
ec: 5.4.2.7
Source :
mol_id organism_scientific expression_system
1 Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711)  (taxid:226900) Escherichia coli  (taxid:562)
strain: ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711
gene: deoB, BC_4087
expression_system_strain: BL21
expression_system_vector_type: PLASMID
expression_system_vector: pET28a(+)
Authors : Panosian, T.D., Nannemann, D.P., Watkins, G., Wadzinski, B., Bachmann, B.O., Iverson, T.M.
Keywords : alkaline phosphatase like core domain, di-metallo catalytic center, manganese binding, Isomerase, manganese, metal-binding
Exp. method : X-RAY DIFFRACTION ( 1.8000 Å )
Citation :

Bacillus cereus Phosphopentomutase Is an Alkaline Phosphatase Family Member That Exhibits an Altered Entry Point into the Catalytic Cycle.

Panosian, T.D.,Nannemann, D.P.,Watkins, G.R.  et al.
(2011)  J.Biol.Chem.  286 : 8043 - 8054

PubMed: 21193409
DOI: 10.1074/jbc.M110.201350

Reaction

Chain : A, B, C
UniProt : Q818Z9 (DEOB_BACCR)
Reaction: EC: Evidence:
Physiological Direction:
alpha-D-ribose 1-phosphate = D-ribose 5-phosphate 5.4.2.7 HAMAP-Rule:MF_00740
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2-deoxy-alpha-D-ribose 1-phosphate = 2-deoxy-D-ribose 5- phosphate 5.4.2.7 HAMAP- Rule:MF_00740
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