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Ligands
Code Name Style Show Link
ACT Acetate ion
COM 1-thioethanesulfonic acid
EDO 1,2-ethanediol
F43 Factor 430
MG Magnesium ion
PEG Di(hydroxyethyl)ether
TP7 Coenzyme B
ZN Zinc ion
Non-standard Residues
Code Name Show
AGM 5-methyl-arginine
GL3 Thioglycin
MGN 2-methyl-glutamine
MHS N1-methylated histidine
SMC S-methylcysteine
Glycosylation
Code Name Emphasize
Modification
Code Name Show
Code : 3M1V   PDBj   RCSB PDB   PDBe
Header : TRANSFERASE
Title : Structural Insight into Methyl-Coenzyme M Reductase Chemistry using Coenzyme B Analogues
Release Data : 2010-09-15
Compound :
mol_id molecule chains synonym
1 Methyl-coenzyme M reductase I subunit alpha A,D MCR I alpha, Coenzyme-B sulfoethylthiotransferase alpha
ec: 2.8.4.1
mol_id molecule chains synonym
2 Methyl-coenzyme M reductase I subunit beta B,E MCR I beta, Coenzyme-B sulfoethylthiotransferase beta
ec: 2.8.4.1
mol_id molecule chains synonym
3 Methyl-coenzyme M reductase I subunit gamma C,F MCR I gamma, Coenzyme-B sulfoethylthiotransferase gamma
ec: 2.8.4.1
Source :
mol_id organism_scientific
1 Methanothermobacter marburgensis  (taxid:79929)
strain: Marburg / DSM 2133
mol_id organism_scientific
2 Methanothermobacter marburgensis  (taxid:79929)
strain: Marburg / DSM 2133
mol_id organism_scientific
3 Methanothermobacter marburgensis  (taxid:79929)
strain: Marburg / DSM 2133
Authors : Cedervall, P.E., Dey, M., Ragsdale, S.W., Wilmot, C.M.
Keywords : Methyl-Coenzyme M Reductase, Metal-binding, Methanogenesis, Methylation, Nickel, Transferase
Exp. method : X-RAY DIFFRACTION ( 1.45 Å )
Citation :

Structural insight into methyl-coenzyme M reductase chemistry using coenzyme B analogues.

Cedervall, P.E.,Dey, M.,Pearson, A.R.  et al.
(2010)  Biochemistry  49 : 7683 - 7693

PubMed: 20707311
DOI: 10.1021/bi100458d

Chain : A, D
UniProt : P11558 (MCRA_METTM)
Reaction: EC: Evidence:
Physiological Direction:
coenzyme B + methyl-coenzyme M = coenzyme M-coenzyme B heterodisulfide + methane 2.8.4.1 PubMed:2269306, PubMed:25691570, PubMed:27140643, PubMed:3350018
left-to-right PubMed:27140643, PubMed:3350018
Chain : B, E
UniProt : P11560 (MCRB_METTM)
Reaction: EC: Evidence:
Physiological Direction:
coenzyme B + methyl-coenzyme M = coenzyme M-coenzyme B heterodisulfide + methane 2.8.4.1 PubMed:2269306, PubMed:25691570, PubMed:27140643, PubMed:3350018
left-to-right PubMed:27140643, PubMed:3350018
Chain : C, F
UniProt : P11562 (MCRG_METTM)
Reaction: EC: Evidence:
Physiological Direction:
coenzyme B + methyl-coenzyme M = coenzyme M-coenzyme B heterodisulfide + methane 2.8.4.1 PubMed:2269306, PubMed:25691570, PubMed:27140643, PubMed:3350018
left-to-right PubMed:27140643, PubMed:3350018