Het-PDB Navi2 (PDB: 3JAF)

The number of atoms exceeds 100,000.
So, it can not be displayed here.

Select unit:

Select hetatm:

information

centroid:

interaction residue:

Select chain: Sequence Hide other chain(s)

Data format:

Color scheme of protein:

Ligands
Code	Name		Link
IVM	(2ae,4e,5'S,6s,6'R,7s,8e,11r,13r,15s,17ar,20r,20ar,20bs)-6'-[(2s)-butan-2-yl]-20,20b-dihydroxy-5',6,8,19-tetramethyl-17 -oxo-3',4',5',6,6',10,11,14,15,17,17a,20,20a,20b-tetradecahydro-2h,7h-spiro[11,15-methanofuro[4,3,2-pq][2,6]benzodioxacy clooctadecine-13,2'-pyran]-7-yl 2,6-dideoxy-4-O-(2,6-dideoxy-3-O-methyl-alpha-L-arabino-hexopyranosyl)-3-O-methyl-alpha-L-arabino-hexopyranoside		PoSSuM
NAG	2-acetamido-2-deoxy-beta-D-glucopyranose		PoSSuM
		: Polysaccharide

Non-standard Residues
Code	Name	Show

Glycosylation
Code	Name	Emphasize

Modification
Code	Name	Show

Download interaction data: 3JAF

Code :

3JAF PDBj RCSB PDB PDBe

Header :

SIGNALING PROTEIN

Title :

Structure of alpha-1 glycine receptor by single particle electron cryo-microscopy, glycine/ivermectin-bound state

Release Data :

2015-09-09

Compound :

mol_id	molecule	chains	synonym
1	Glycine receptor subunit alphaZ1	A,B,C,D,E	alpha1 glycine receptor

Source :

mol_id	organism_scientific	organism_common	expression_system
1	Danio rerio (taxid:7955)	Zebra fish	Spodoptera frugiperda (taxid:7108)
	gene: glra1 expression_system_common: Fall armyworm expression_system_cell_line: sf9 expression_system_vector_type: baculovirus

Authors :

Du, J., Lu, W., Wu, S.P., Cheng, Y.F., Gouaux, E.

Keywords :

cys loop receptor, alpha-1 glycine receptor, glycine, ivermectin, SIGNALING PROTEIN

Exp. method :

ELECTRON MICROSCOPY ( 3.8 Å )

Citation :

Glycine receptor mechanism elucidated by electron cryo-microscopy.

Du, J.,Lu, W.,Wu, S. et al.
(2015) Nature 526 : 224 - 229

PDB ID: 3JAF