Brand  (β version)

PDB ID: 3G08

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Ligands
Code Name Style Show Link
FEE N-{(1s,2s,3r)-1-[(alpha-D-galactopyranosyloxy)methyl]-2,3-dihydroxyoctyl}tetracosanamide PoSSuM
PLM Palmitic acid PoSSuM
Non-standard Residues
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Glycosylation
Code Name Emphasize
NAG 2-acetamido-2-deoxy-beta-D-glucopyranose
Modification
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Structure summary

Code : 3G08   PDBj   RCSB PDB   PDBe
Header : IMMUNE SYSTEM
Title : Crystal structure of the alpha-galactosylceramide analog OCH in complex with mouse CD1d
Release Data : 2009-12-08
Compound :
mol_id molecule chains
1 T-cell surface glycoprotein CD1d1 A
fragment: UNP residues 19-298
mol_id molecule chains
2 Beta-2 microglobulin B
fragment: UNP residues 21-119
Source :
mol_id organism_scientific organism_common expression_system
1 Mus musculus  (taxid:10090) Mouse Spodoptera frugiperda  (taxid:7108)
gene: Cd1.1, CD1d, Cd1d1
expression_system_strain: SF9
expression_system_vector_type: baculovirus transfer vector
expression_system_plasmid: pBACp10pH
mol_id organism_scientific organism_common expression_system
2 Mus musculus  (taxid:10090) Mouse Spodoptera frugiperda  (taxid:7108)
gene: B2m, beta 2 microglobulin, mCG_11606, RP23-34E24.5-001
expression_system_strain: SF9
expression_system_vector_type: baculovirus transfer vector
expression_system_plasmid: pBACp10pH
Authors : Zajonc, D.M.
Keywords : antigen presentation, glycolipid, NKT cells, Cell membrane, Endosome, Glycoprotein, Immune response, Immunoglobulin domain, Innate immunity, Lysosome, Membrane, Transmembrane, MHC I, Secreted, IMMUNE SYSTEM
Exp. method : X-RAY DIFFRACTION ( 1.60 Å )
Citation :

Mechanisms for glycolipid antigen-driven cytokine polarization by Valpha14i NKT cells.

Sullivan, B.A.,Nagarajan, N.A.,Wingender, G.  et al.
(2010)  J.Immunol.  184 : 141 - 153

PubMed: 19949076
DOI: 10.4049/jimmunol.0902880

Reaction

Chain : A
UniProt : P11609 (CD1D1_MOUSE)
Reaction : -
Chain : B
UniProt : Q91XJ8 (B2MG_MOUSE)
Reaction : -