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Ligands
Code Name Style Show Link
Non-standard Residues
Code Name Show
JDT 2'-deoxy-5-ethyluridine 5'-(dihydrogen phosphate)
Glycosylation
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Modification
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Code : 2RRQ   PDBj   RCSB PDB   PDBe
Header : DNA
Title : DNA oligomer containing propylene cross-linked cyclic 2'-deoxyuridylate dimer
Release Data : 2011-06-08
Compound :
mol_id molecule chains
1 DNA (5'-D(*CP*CP*TP*TP*CP*AP*(JDT)P*TP*AP*CP*AP*TP*CP*C)-3') A
mol_id molecule chains
2 DNA (5'-D(*GP*GP*AP*TP*GP*TP*AP*AP*TP*GP*AP*AP*GP*G)-3') B
Source :
mol_id organism_scientific
1
synthetic: yes
mol_id organism_scientific
2
synthetic: yes
Authors : Furuita, K., Murata, S., Jee, J.G., Ichikawa, S., Matsuda, A., Kojima, C.
Keywords : DNA, nucleic acid, deoxyuridylate, bent DNA
Exp. method : SOLUTION NMR
Citation :

Structural Feature of Bent DNA Recognized by HMGB1

Furuita, K.,Murata, S.,Jee, J.G.  et al.
(2011)  J.Am.Chem.Soc.  133 : 5788 - 5790

PubMed: 21443191
DOI: 10.1021/ja2013399