Brand  (β version)

PDB ID: 2DP7

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Ligands
Code Name Style Show Link
CMY (6-aminohexyl)carbamic acid PoSSuM
K Potassium ion PoSSuM
MG Magnesium ion PoSSuM
Non-standard Residues
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Glycosylation
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Modification
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Structure summary

Code : 2DP7   PDBj   RCSB PDB   PDBe
Header : DNA
Title : Crystal Structure of D(CGCGAATXCGCG) Where X is 5-(N-aminohexyl)carbamoyl-2'-deoxyuridine
Release Data : 2007-04-17
Compound :
mol_id molecule chains
1 DNA (5'-D(*DCP*DGP*DCP*DGP*DAP*DAP*DTP*DUP*DCP*DGP*DCP*DG)-3') A,B
Source :
mol_id organism_scientific
1
synthetic: yes
other_details: This DNA dodecamer is a synthetic construct.
Authors : Juan, E.C.M., Kondo, J., Kurihara, T., Ito, T., Ueno, Y., Matsuda, A., Takenaka, A.
Keywords : modified nucleotide, 5-(N-aminohexyl)carbamoyl-2'-deoxyuridine, B-DNA, DNA
Exp. method : X-RAY DIFFRACTION ( 1.55 Å )
Citation :

Crystal structures of DNA:DNA and DNA:RNA duplexes containing 5-(N-aminohexyl)carbamoyl-modified uracils reveal the basis for properties as antigene and antisense molecules

Juan, E.C.M.,Kondo, J.,Kurihara, T.  et al.
(2007)  Nucleic Acids Res.  35 : 1969 - 1977

PubMed: 17341465
DOI: 10.1093/nar/gkl821